 |
| Job Description | O43719 | | Confidence | 99.72% | Date | Wed May 9 18:03:47 BST 2012 |
| Rank | 35 | Aligned Residues | 119 |
| % Identity | 17% | Template | c2ku7A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:mll1 phd3-cyp33 rrm chimeric protein; |
PDBTitle: solution structure of mll1 phd3-cyp33 rrm chimeric protein
|
| Resolution | UNK |
|
 |
|   |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | D | V | H | A | R | T | A | E | E | P | P | Q | E | K | A | P | E | P | T | D | A | R | K | K | G | E | K | R | K | A | E | S | G | W | F | H | V | E | E | D | R | N | T | N | V | Y | V | S | G | L | P | P | D | I | T | V | D | E | F | I | Q | L | M | S | K | F | G | I | I | M | R | D | P | Q | T | E | E | F | K |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . |
| Template Sequence |   |
D | E | M | Y | E | I | L | S | N | L | P | E | S | V | A | Y | T | C | V | N | C | T | E | R | H | V | D | G | G | S | G | G | S | G | G | S | G | G | S | A | T | T | K | R | V | L | Y | V | G | G | L | A | E | E | V | D | D | K | V | L | H | A | A | F | I | P | F | G | D | I | T | D | . |
. |
. |
. |
. |
. |
. |
. |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | S |
| T | T | T | T |
|
| S | S |
|
| T | T | T | S |
|
|
|
| S |
| S | S |
| S | S |
| S | S |
| S | S |
|
|  |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  | . | . | . | . | . | . | . | . |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
|
|
|
|   |
|   |   |
170 | . | . | . | . | . | |
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | K | L | Y | K | D | . |
N | Q | G | N | L | K | G | D | G | L | C | C | Y | L | K | R | E | S | V | E | L | A | L | K | L | L | D | E | D | E | I | R | G | Y | K | L | H | V | E | V | A |
| Query Conservation |   |
  |
|
|   |   |
| . |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |   |
|
| Template Sequence |   |
I | Q | I | P | L | D | Y | E | T | E | K | H | R | G | F | A | F | V | E | F | E | L | A | E | D | A | A | A | A | I | D | N | M | N | E | S | E | L | F | G | R | T | I | R | V | N | L | A |
| Template Known Secondary structure |   |
 |  |
|
|
|
| T | T | T |
|
|
|
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | S | T |  |  |  |  | T | T |  |  |  |  |  |  |
| . |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|