Job Description O43719 Confidence 99.44% Date Wed May 9 18:03:47 BST 2012 Rank 199 Aligned Residues 72 % Identity 22% Template c2krbA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 3 PDBTitle: solution structure of eif3b-rrm bound to eif3j peptide Resolution UNK

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		133	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		T	N	V	Y	V	S	G	L	P	P	.	.	.	.	.	.	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																				.	.	.	.	.	.	.	.							.
Template Conservation																																					.	.	.	.	.	.	.	.							.
Template Sequence		S	V	I	V	V	D	N	V	P	Q	V	G	P	D	R	L	E	K	L	K	N	V	I	H	K	I	F	S	K	F	G	K	I	T	N	.	.	.	.	.	.	.	.	D	F	Y	P	E	E	.	D	G	K	T	K	G	Y	I	F	L	E	Y	A	S	P	A	H	A	V	D	A	V	K	N	A	D	G	Y	K	L
Template Known Secondary structure								S						T	T	T														T	T						.	.	.	.	.	.	.	.						B	.	T	T	B										S	S									T	T	S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.							.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		207	.		.	210	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		R	G	.	Y	K	L	H	V
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	K	Q	H	T	F	R	V
Template Known Secondary structure		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions