Job Description O43719 Confidence 99.75% Date Wed May 9 18:03:47 BST 2012 Rank 26 Aligned Residues 109 % Identity 17% Template c2kn4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:immunoglobulin g-binding protein g, splicing factor; PDBTitle: the structure of the rrm domain of sc35 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		A	R	K	K	G	E	K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L
Query Conservation																																																																			.
Alig confidence																																																					.	.	.	.	.	.	.	.							.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		T	K	T	F	T	V	T	E	G	S	H	H	H	H	H	H	M	D	V	E	G	M	T	S	L	K	V	D	N	L	T	Y	R	T	S	P	D	T	L	R	R	V	F	E	K	Y	G	R	V	G	D	.	.	.	.	.	.	.	.	V	Y	I	P	R	D	R	Y	T	K	E	S	R	G	F	A	F	V	R	F	H
Template Known Secondary structure		T	T											S	S							B								S			T	T														S					.	.	.	.	.	.	.	.							S	S		T	T	S									S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	R	D	A	E	D	A	M	D	A	M	D	G	A	V	L	D	G	R	E	L	R	V	Q	M	A	R	Y	G	R	P	P	D	S	H	H	S
Template Known Secondary structure		B											S	T	T			S	S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions