Job Description O43719 Confidence 99.45% Date Wed May 9 18:03:47 BST 2012 Rank 195 Aligned Residues 74 % Identity 34% Template c2ki2A_ PDB info PDB header:rna binding protein/ss-dna binding prote Chain: A: PDB Molecule:ss-dna binding protein 12rnp2; PDBTitle: solution structure of ss-dna binding protein 12rnp22 precursor, hp0827(o25501_helpy) form helicobacter pylori Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																																												.
Alig confidence																														.	.	.	.	.	.	.	.							.																.
Template Conservation																														.	.	.	.	.	.	.	.																							.
Template Sequence		N	I	Y	V	G	N	L	V	Y	S	A	T	S	E	Q	V	K	E	L	F	S	Q	F	G	K	V	F	N	.	.	.	.	.	.	.	.	V	K	L	I	Y	D	R	E	T	K	K	P	K	G	F	G	F	V	E	M	Q	E	.	E	S	V	S	E	A	I	A	K	L	D	N	T	D	F	M	G	R	T	I	R
Template Known Secondary structure										T	T	S	S					T	T	T					T			S		.	.	.	.	.	.	.	.							S	S	S													T	.	T								T	S		S	S			S	S	S	S		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		213	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions