Job Description O43719 Confidence 99.70% Date Wed May 9 18:03:47 BST 2012 Rank 37 Aligned Residues 108 % Identity 22% Template c2jwnB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:embryonic polyadenylate-binding protein 2-b; PDBTitle: solution nmr structure of the protease-resistent domain of2 xenopus laevis epabp2 Resolution UNK

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		R	K	K	G	E	K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K
Query Conservation																																																																		.
Alig confidence																																																				.	.	.	.	.	.	.	.							.
Template Conservation																																																				.	.	.	.	.	.	.	.
Template Sequence		G	A	Y	T	E	G	P	P	Q	P	L	S	A	E	E	K	K	E	I	D	K	R	S	V	Y	V	G	N	V	D	Y	G	S	T	A	Q	D	L	E	A	H	F	S	S	C	G	S	I	N	R	.	.	.	.	.	.	.	.	I	T	I	L	C	D	K	F	S	G	H	P	K	G	Y	A	Y	I	E	F	A	E
Template Known Secondary structure		T	T	T	B			S	S														T									T	T												T	T	S					.	.	.	.	.	.	.	.								T	T	S	S										S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		R	N	S	V	D	A	A	V	A	.	M	D	E	T	V	F	R	G	R	T	I	K	V	L	P	K	R	T	N	M	P	G	I	S	S	T	D	R
Template Known Secondary structure										T	.	T	S	S				T	T													S
Template Predicted Secondary structure											.
Template SS confidence
		88	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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