Job Description O43719 Confidence 99.61% Date Wed May 9 18:03:47 BST 2012 Rank 102 Aligned Residues 78 % Identity 22% Template c2jvrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:nucleolar protein 3; PDBTitle: segmental isotope labeling of npl3p Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	K	R	Y	R	I	T	M	K	N	L	P	E	G	C	S	W	Q	D	L	K	D	L	A	R	E	N	S	L	E	.	.	.	.	.	.	.	.	.	.	T	T	F	S	S	V	N	T	R	D	F	D	G	T	G	A	L	E	F	P	S	E	E	I	L	V	E	A	L	E	R	L	N	N	I	E	F	R	G
Template Known Secondary structure													S	S																T			.	.	.	.	.	.	.	.	.	.		S					S	S		S	S	S								S	S											T	T	T				T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.											.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		209	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	T	V	E	R	D
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions