Job Description O43719 Confidence 99.73% Date Wed May 9 18:03:47 BST 2012 Rank 33 Aligned Residues 79 % Identity 20% Template c2i38A_ PDB info PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20 Resolution UNK

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		L	D	C	K	V	Y	V	G	N	L	G	N	N	G	N	K	T	E	L	E	R	A	F	G	Y	Y	G	P	L	R	S	.	.	.	.	.	.	.	.	V	W	V	A	R	N	.	.	.	.	P	P	G	F	A	F	V	E	F	E	D	P	R	D	A	A	D	A	V	R	D	L	D	G	R	T	L	C	G	C	R
Template Known Secondary structure		S	S	S	S							T	T	T												T	T	S			S		.	.	.	.	.	.	.	.					S	S	.	.	.	.	S	T	T							S												T	S	S	S		S	T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	E	V	A	K	F	Q	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	V	E	L	S	N	G	E	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions