Job Description O43719 Confidence 99.52% Date Wed May 9 18:03:47 BST 2012 Rank 172 Aligned Residues 89 % Identity 22% Template c2hvzA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:splicing factor, arginine/serine-rich 7; PDBTitle: solution structure of the rrm domain of sr rich factor 9g8 Resolution UNK

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		K	V	Y	V	G	N	L	G	T	G	A	G	K	G	E	L	E	R	A	F	S	Y	Y	G	P	L	R	T	.	.	.	.	.	.	.	.	V	W	I	A	R	N	.	.	.	.	P	P	G	F	A	F	V	E	F	E	D	P	R	D	A	E	D	A	V	R	G	L	D	G	K	V	I	C	G	S	R	V	R	V
Template Known Secondary structure										S	S		S															S		.	.	.	.	.	.	.	.					S	S	.	.	.	.	S	S	S							S	S														S		S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K	K	K	K	C	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	S	T	G	M	P	R	R	S	R	F	D	R	P	P	A	R	R	K	L
Template Known Secondary structure				S	S	S				S	S				S				S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions