Job Description O43719 Confidence 99.42% Date Wed May 9 18:03:47 BST 2012 Rank 201 Aligned Residues 75 % Identity 17% Template c2hgnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: nmr structure of the third qrrm domain of human hnrnp f Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.																															.
Template Conservation																														.	.	.	.	.	.	.	.	.																															.
Template Sequence		H	C	V	H	M	R	G	L	P	Y	K	A	T	E	N	D	I	Y	N	F	F	S	P	L	N	P	V	R	.	.	.	.	.	.	.	.	.	V	H	I	E	I	G	P	D	G	R	V	T	G	E	A	D	V	E	F	A	T	H	E	E	A	V	A	A	M	S	.	K	D	R	A	N	M	Q	H	R	Y	I	E
Template Known Secondary structure								S			T	T												S				S		.	.	.	.	.	.	.	.	.						S	S	S	S		S	S								S									T	T	.			S		S	S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.										.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.
		213	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	L	N	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions