Job Description O43719 Confidence 99.54% Date Wed May 9 18:03:47 BST 2012 Rank 159 Aligned Residues 84 % Identity 23% Template c2hgmA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: nmr structure of the second qrrm domain of human hnrnp f Resolution UNK

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.																																.
Template Conservation																																						.	.	.	.	.	.	.																																.
Template Sequence		S	A	D	S	A	N	D	G	F	V	R	L	R	G	L	P	F	G	C	T	K	E	E	I	V	Q	F	F	S	G	L	E	I	V	P	N	.	.	.	.	.	.	.	G	I	T	L	P	V	D	P	E	G	K	I	T	G	E	A	F	V	Q	F	A	S	Q	E	L	A	E	K	A	L	G	.	K	H	K	E	R
Template Known Secondary structure		T	T		S	S	S											T	T										T	T	T	S						.	.	.	.	.	.	.								S	S	S	S	S		S							S	S	T	T							T	.	T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																																.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	H	R	Y	I	E	V	F	K	S	S
Template Known Secondary structure		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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