Job Description O43719 Confidence 99.69% Date Wed May 9 18:03:47 BST 2012 Rank 38 Aligned Residues 96 % Identity 23% Template c2fy1A_ PDB info PDB header:structural protein/rna Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family PDBTitle: a dual mode of rna recognition by the rbmy protein Resolution UNK

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		V	E	A	D	H	P	G	K	L	F	I	G	G	L	N	R	E	T	N	E	K	M	L	K	A	V	F	G	K	H	G	P	I	S	E	.	.	.	.	.	.	.	.	V	L	L	I	K	D	R	T	S	K	S	R	G	F	A	F	I	T	F	E	N	P	A	D	A	K	N	A	A	K	D	M	N	G	K	S	L
Template Known Secondary structure			T	T		S										T	T	T												T	S	S			S		.	.	.	.	.	.	.	.						S	T	T	T	T										S	S												S	S		B
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	K	A	I	K	V	E	Q	A	K	K	P	S	F	Q	S	G	G	R	R	R	P	P
Template Known Secondary structure		S	S	S	B									S	S		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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