Job Description O43719 Confidence 99.79% Date Wed May 9 18:03:47 BST 2012 Rank 19 Aligned Residues 145 % Identity 16% Template c2f3jA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:rna and export factor binding protein 2; PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155). Resolution UNK

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	F	I	A	T	Y	Q	A	N	Y	G	F	S	N	D	G	A	S	S	S	T	A	N	V	E	D	V	H	A	R	T	A	E	E	P	P	Q	E	K	A	P	E	P	T	D	A	R	K	K	G	E	K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I
Query Conservation
Alig confidence																																																														.	.	.
Template Conservation																																																														.	.	.
Template Sequence		D	D	I	I	K	L	N	R	N	Q	R	R	V	N	R	G	G	G	P	R	R	N	R	P	A	I	A	R	G	G	R	N	R	P	A	P	Y	S	R	P	K	P	L	P	D	K	W	Q	H	D	L	F	D	S	G	C	G	G	G	E	.	.	.	G	V	E	T	G	A	K	L	L	V	S	N	L	D	F	G	V
Template Known Secondary structure										T			S		S	S	S			S	S	S	S	S				T	T	T	S	S	T	T	T			S	S	S					T	T		S	S		S	S	S		S	S					S	.	.	.	S		T	T											S
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		S	D	A	D	I	Q	E	L	F	A	E	F	G	T	L	K	K	.	.	.	.	.	.	.	.	A	A	V	D	Y	D	R	S	G	R	S	L	G	T	A	D	V	H	F	E	R	R	A	D	A	L	K	A	M	K	Q	Y	K	G	V	P	L	D	G	R	P	M	D	I	Q	L	V	A	S	Q	I
Template Known Secondary structure													T	S			S		.	.	.	.	.	.	.	.							T	T	S	S		S								S												S	T	T		B		S	S	S	B							S	S	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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