Job Description O43719 Confidence 99.72% Date Wed May 9 18:03:47 BST 2012 Rank 34 Aligned Residues 108 % Identity 15% Template c2do0A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L
Query Conservation
Alig confidence												.																																			.	.	.	.	.	.	.	.
Template Conservation												.																																			.	.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	A	L	Q	.	A	G	R	L	G	S	T	V	F	V	A	N	L	D	Y	K	V	G	W	K	K	L	K	E	V	F	S	M	A	G	V	V	V	R	.	.	.	.	.	.	.	.	A	D	I	L	E	D	K	D	G	K	S	R	G	I	G	T	V	T	F	E	Q	S	I	E	A	V	Q
Template Known Secondary structure												.						S						S			T	T											T	T	T	S					.	.	.	.	.	.	.	.							T	T		S										S	S
Template Predicted Secondary structure												.																																			.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.									.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K	K	K	K	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	S	M	F	N	G	Q	L	L	F	D	R	P	M	H	V	K	M	D	E	R	A	L	P	K	G	D	F	F	P	P	E	R	P	Q	Q
Template Known Secondary structure							T	T				T	T									S						S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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