Job Description O43719 Confidence 99.66% Date Wed May 9 18:03:47 BST 2012 Rank 57 Aligned Residues 91 % Identity 29% Template c2dnzA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 23; PDBTitle: solution structure of the second rna binding domain of rna2 binding motif protein 23 Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R
Query Conservation																																																	.
Alig confidence																																			.	.	.	.	.	.	.	.							.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		S	S	G	S	S	G	L	Y	V	G	S	L	H	F	N	I	T	E	D	M	L	R	G	I	F	E	P	F	G	K	I	D	N	.	.	.	.	.	.	.	.	I	V	L	M	K	D	S	D	T	G	R	S	K	G	Y	G	F	I	T	F	S	D	S	E	C	A	R	R	A	L	E	Q	L	N	G	F	E	L	A
Template Known Secondary structure			S									S			T	T											T	T	T	S					.	.	.	.	.	.	.	.							S	S	S					S							S													T	T			S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.									.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	P	M	R	V	G	H	V	T	E	R	L	D	G	G	S	G	P	S
Template Known Secondary structure		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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