Job Description O43719 Confidence 99.75% Date Wed May 9 18:03:47 BST 2012 Rank 27 Aligned Residues 84 % Identity 33% Template c2dnyA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:fuse-binding protein-interacting repressor, PDBTitle: solution structure of the third rna binding domain of fbp-2 interacting repressor, siahbp1 Resolution UNK

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.									.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence		R	M	R	H	E	R	V	V	I	I	K	N	M	F	H	P	M	D	F	E	D	D	P	L	V	L	N	E	I	R	E	D	L	R	V	E	C	S	K	F	G	Q	I	R	K	L	L	L	.	.	.	.	.	.	.	.	F	D	R	H	P	D	G	V	A	S	V	S	F	R	D	P	E	E	A	D	Y	C	I	Q
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		R	K	Q	E	S	T	V	M	V	L	R	N	M	V	D	P	K	D	I	D	.	.	.	.	.	.	D	D	L	E	G	E	V	T	E	E	C	G	K	F	G	A	V	N	R	V	I	I	Y	Q	E	K	Q	G	E	E	E	D	A	E	I	I	V	K	I	F	V	E	F	S	I	A	S	E	T	H	K	A	I	Q
Template Known Secondary structure													S	S	S		T	T	T			.	.	.	.	.	.												T	T	T	S														S	S	T	T												S	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.							460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	G	R	W	F	G	G	R	Q	I	T	A	Q	A	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	N	G	R	W	F	A	G	R	K	V	V	A	E	V	Y	D
Template Known Secondary structure				T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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