Job Description O43719 Confidence 96.57% Date Wed May 9 18:03:47 BST 2012 Rank 222 Aligned Residues 79 % Identity 16% Template c2dnrA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:synaptojanin-1; PDBTitle: solution structure of rna binding domain in synaptojanin 1 Resolution UNK

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	H	E	R	V	V	I	I	K	N	M	F	H	P	M	D	F	E	D	D	P	L	V	L	N	E	I	R	E	D	L	R	V	E	C	S	K	F	G	Q	I	R	K	L	L	L	F	D	R	H	P	D	G	V	A	S	V	S	F	R	D	P	E	E	A	D	Y	C	I	Q	T	L	D	G	R	W	F	G	G
Query Conservation
Alig confidence																			.	.	.																																.	.	.	.												.
Template Conservation																			.	.	.																																.	.	.	.												.
Template Sequence		G	S	S	G	G	T	V	L	V	S	I	K	S	S	L	P	E	.	.	.	N	N	F	F	D	D	A	L	I	D	E	L	L	Q	Q	F	A	S	F	G	E	V	I	L	I	R	F	V	E	D	K	.	.	.	.	M	W	V	T	F	L	E	G	S	S	A	.	L	N	V	L	S	L	N	G	K	E	L	L	N
Template Known Secondary structure				S	S										S	S	T	T	.	.	.	T		S															T	T										S	S	S	.	.	.	.						S	S					.			G	G	G	G	T	T				T	T
Template Predicted Secondary structure																			.	.	.																																.	.	.	.												.
Template SS confidence
		889	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.				.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.					.	.	.	940	.	.	.	.	.	.	.		.	.	950	.	.	.	.	.	.	.	.	.	960
		340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	I	T	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	I	T	I	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		961	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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