Job Description O43719 Confidence 99.59% Date Wed May 9 18:03:47 BST 2012 Rank 121 Aligned Residues 84 % Identity 23% Template c2dnqA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 4b; PDBTitle: solution structure of rna binding domain 1 in rna-binding2 protein 30 Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Sequence		S	S	G	M	V	K	L	F	I	G	N	L	P	R	E	A	T	E	Q	E	I	R	S	L	F	E	Q	Y	G	K	V	L	E	.	.	.	.	.	.	.	.	C	D	I	I	.	.	.	.	.	.	.	K	N	Y	G	F	V	H	I	E	D	K	T	A	A	E	D	A	I	R	N	L	H	H	Y	K	L	H	G
Template Known Secondary structure		S	S									S			S	S												T	S	S					.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	T	T							S	S												T	T		B		S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions