Job Description O43719 Confidence 99.68% Date Wed May 9 18:03:47 BST 2012 Rank 44 Aligned Residues 92 % Identity 17% Template c2dnoA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant; PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant Resolution UNK

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	.
Query Conservation																																																																																	.
Alig confidence																																				.	.	.	.	.	.	.	.																																						.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		S	R	G	E	D	R	K	L	F	V	G	M	L	G	K	Q	Q	T	D	E	D	V	R	K	M	F	E	P	F	G	T	I	D	E	.	.	.	.	.	.	.	.	C	T	V	L	R	G	P	D	G	T	S	K	G	C	A	F	V	K	F	Q	T	H	A	E	A	Q	A	A	I	N	T	L	H	S	S	R	T	L
Template Known Secondary structure			S				S						S			S	S											G	G	G	S					.	.	.	.	.	.	.	.							T	T												S	S												T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
				207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	G	A	S	S	S	L	V	V	K	F	A	D	T	E	K	E	S	G	P	S	S	G
Template Known Secondary structure		T	T		S	S	S													S		S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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