Job Description O43719 Confidence 99.65% Date Wed May 9 18:03:47 BST 2012 Rank 60 Aligned Residues 98 % Identity 19% Template c2dngA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 4h; PDBTitle: solution structure of rna binding domain in eukaryotic2 translation initiation factor 4h Resolution UNK

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L
Query Conservation																																																										.
Alig confidence																																											.	.	.	.	.	.	.	.	.							.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		S	G	S	S	G	K	E	L	P	T	E	P	P	Y	T	A	Y	V	G	N	L	P	F	N	T	V	Q	G	D	I	D	A	I	F	K	D	L	S	I	R	S	.	.	.	.	.	.	.	.	.	V	R	L	V	R	D	K	D	T	D	K	F	K	G	F	C	Y	V	E	F	D	E	V	D	S	L	K	E	A	L
Template Known Secondary structure											S	S	S								S			T	T										T	T	T	S					.	.	.	.	.	.	.	.	.							S	S	S		S										S	S								G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.										.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		T	.	Y	D	G	A	L	L	G	D	R	S	L	R	V	D	I	A	E	G	R	K	Q	D	K	S	G	P	S
Template Known Secondary structure		G	.	G	T	T				T	T																S	S
Template Predicted Secondary structure			.
Template SS confidence
		99		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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