Job Description O43719 Confidence 99.58% Date Wed May 9 18:03:47 BST 2012 Rank 127 Aligned Residues 87 % Identity 17% Template c2dh9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.							.
Template Conservation																																			.	.	.	.	.	.	.	.							.
Template Sequence		S	S	G	S	S	G	I	F	V	R	N	L	P	F	D	F	T	W	K	M	L	K	D	K	F	N	E	C	G	H	V	L	Y	.	.	.	.	.	.	.	.	A	D	I	K	M	E	.	N	G	K	S	K	G	C	G	V	V	K	F	E	S	P	E	V	A	E	R	A	C	R	M	M	N	G	M	K	L	S	G
Template Known Secondary structure			S									S			T	T												T	T	S					.	.	.	.	.	.	.	.							.	T	T				S							S	S											T	T	T			T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.							.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.									.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	I	D	V	R	I	D	R	N	A	S	G	P	S	S
Template Known Secondary structure										T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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