Job Description O43719 Confidence 99.52% Date Wed May 9 18:03:47 BST 2012 Rank 171 Aligned Residues 81 % Identity 19% Template c2dgxA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0430 protein; PDBTitle: solution structure of the rna recognition motif in kiaa04302 protein Resolution UNK

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	.	.	.	.	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.											.	.	.	.	.	.	.	.										.	.
Template Conservation																																		.	.	.	.	.	.	.	.										.	.
Template Sequence		D	V	Q	V	S	N	I	D	Y	R	L	S	R	K	E	L	Q	Q	L	L	Q	E	A	F	A	R	H	G	K	V	K	S	.	.	.	.	.	.	.	.	V	E	L	S	P	H	T	D	Y	.	.	Q	L	K	A	V	V	Q	M	E	N	L	Q	D	A	I	G	A	V	N	S	L	H	R	Y	K	I	G	S	K
Template Known Secondary structure							S			T	T	S																	S					.	.	.	.	.	.	.	.					S			S	T	.	.	T								S	S												T	T				T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.										.	.
Template SS confidence
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.									.	.	590	.	.	.	.	.	.			.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	L	V	S	L	A	T	G	A	S	G	P	S	S
Template Known Secondary structure											S	S
Template Predicted Secondary structure
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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