Job Description O43719 Confidence 99.58% Date Wed May 9 18:03:47 BST 2012 Rank 123 Aligned Residues 91 % Identity 18% Template c2dgwA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 19; PDBTitle: solution structure of the second rna recognition motif in2 rna-binding protein 19 Resolution UNK

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.																															.
Template Conservation																																								.	.	.	.	.	.	.	.	.																															.
Template Sequence		G	S	S	G	S	S	G	T	T	C	H	T	V	K	L	R	G	A	P	F	N	V	T	E	K	N	V	M	E	F	L	A	P	L	K	P	V	A	.	.	.	.	.	.	.	.	.	I	R	I	V	R	N	A	H	G	N	K	T	G	Y	I	F	V	D	F	S	N	E	E	E	V	K	Q	A	L	K	.	C	N
Template Known Secondary structure																					S	S											T	T	S			S		.	.	.	.	.	.	.	.	.							T	T	S											S	S										.	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.										.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	Y	M	G	G	R	Y	I	E	V	F	R	E	K	S	G	P	S	S	G
Template Known Secondary structure		S				T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions