Job Description O43719 Confidence 99.61% Date Wed May 9 18:03:47 BST 2012 Rank 112 Aligned Residues 90 % Identity 22% Template c2dgtA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 30; PDBTitle: solution structure of the second rna binding domain in rna-2 binding protein 30 Resolution UNK

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	K	A	S	T	K	L	H	V	G	N	I	S	P	T	C	T	N	Q	E	L	R	A	K	F	E	E	Y	G	P	V	I	E	.	.	.	.	.	.	.	.	C	D	I	V	.	.	.	.	.	.	.	K	D	Y	A	F	V	H	M	E	R	A	E	D	A	V	E	A	I	R	G	L	D
Template Known Secondary structure					S					S	S							S			S	S												T	T	S					.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	S	S							S													T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	E	F	Q	G	K	R	M	H	V	Q	L	S	T	S	R	L	R	T	A	S	G	P	S
Template Known Secondary structure		T				T	T								S	S				S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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