Job Description O43719 Confidence 99.62% Date Wed May 9 18:03:47 BST 2012 Rank 99 Aligned Residues 97 % Identity 24% Template c2dgsA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:daz-associated protein 1; PDBTitle: solution structure of the second rna binding domain in daz-2 associated protein 1 Resolution UNK

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L
Query Conservation																																																							.
Alig confidence																																									.	.	.	.	.	.	.	.							.																									.
Template Conservation																																									.	.	.	.	.	.	.	.																																.
Template Sequence		G	S	S	G	S	S	G	S	K	S	N	K	I	F	V	G	G	I	P	H	N	C	G	E	T	E	L	R	E	Y	F	K	K	F	G	V	V	T	E	.	.	.	.	.	.	.	.	V	V	M	I	Y	D	A	E	K	Q	R	P	R	G	F	G	F	I	T	F	E	D	E	Q	S	V	D	Q	A	V	N	.	M
Template Known Secondary structure									S	S								S			S	S											S	S	S	S					.	.	.	.	.	.	.	.							T	T	T		S			S							S	S										.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.																																.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	H	D	I	M	G	K	K	V	E	V	K	R	A	E	P	R	D	S	K	S	S	G	P	S	S
Template Known Secondary structure					B	S	S	S		B																S	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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