Job Description O43719 Confidence 99.52% Date Wed May 9 18:03:47 BST 2012 Rank 173 Aligned Residues 87 % Identity 20% Template c2db1A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein f homolog Resolution UNK

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D
Query Conservation
Alig confidence																																										.	.	.	.	.																															.
Template Conservation																																										.	.	.	.	.																															.
Template Sequence		L	G	P	E	G	G	E	G	Y	V	V	K	L	R	G	L	P	W	S	C	S	I	E	D	V	Q	N	F	L	S	D	C	T	I	H	D	G	V	A	G	.	.	.	.	.	V	H	F	I	Y	T	R	E	G	R	Q	S	G	E	A	F	V	E	L	E	S	E	D	D	V	K	L	A	L	K	.	K	D	R	E
Template Known Secondary structure		S	S	S		B										S			T	T										T	T	T	S		B	T	T	G	G	G	G	.	.	.	.	.							S	S	S										B	S	S								G	G	.	G	T	T
Template Predicted Secondary structure																																										.	.	.	.	.																															.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	G	H	R	Y	I	E	V	F	K	S	H
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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