Job Description O43719 Confidence 99.64% Date Wed May 9 18:03:47 BST 2012 Rank 66 Aligned Residues 101 % Identity 22% Template c2d9pA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:polyadenylate-binding protein 3; PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3 Resolution UNK

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.							.
Template Conservation																																													.	.	.	.	.	.	.	.							.
Template Sequence		S	S	G	S	S	G	D	R	I	T	R	Y	Q	V	V	N	L	Y	V	K	N	L	D	D	G	I	D	D	E	R	L	R	K	A	F	S	P	F	G	T	I	T	S	.	.	.	.	.	.	.	.	A	K	V	M	M	E	.	G	G	R	S	K	G	F	G	F	V	C	F	S	S	P	E	E	A	T	K	A	V
Template Known Secondary structure													S	S											T	T									T	T	T	T	T	S					.	.	.	.	.	.	.	.							.	S	S	S										S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.							.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	M	N	G	R	I	V	A	T	K	P	L	Y	V	A	L	A	Q	R	K	E	E	R	Q	S	G	P	S	S
Template Known Secondary structure					T	T		B	S	S	S	S	B							S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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