Job Description O43719 Confidence 99.56% Date Wed May 9 18:03:47 BST 2012 Rank 146 Aligned Residues 81 % Identity 15% Template c2a3jA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a; PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein Resolution UNK

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	.	.	.	.	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	T	E	P	S	Q	V	V	L	I	T	N	I	N	P	E	V	P	K	E	K	L	Q	A	L	L	Y	A	L	A	S	S	Q	G	D	I	.	.	.	.	.	.	.	.	.	.	L	D	I	V	V	D	L	S	D	D	N	S	G	K	A	Y	I	V	F	A	T	Q	E	S	A	Q	A	F	V	E	A	F	Q
Template Known Secondary structure					S			S						S			T	T	S																	S			.	.	.	.	.	.	.	.	.	.										S	S									S	S											S	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60											.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	P	F	Q	G	N	P	L	V	I	T	F	S	E
Template Known Secondary structure		T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions