Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence98.28%DateThu Apr 26 09:30:17 BST 2012
Rank86Aligned Residues154
% Identity27%Templatec3conA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:gtpase nras; PDBTitle: crystal structure of the human nras gtpase bound with gdp
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
Query Conservation     





 







 





    

  
       
  

      

                          
Alig confidence 





















..........................................................
Template Conservation   
 

 


   






 
 ..........................................................
Template Sequence  TEYKLVVVGAGGVGKSALTIQL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
STTSS..........................................................
Template Predicted Secondary structure 






..........................................................
Template SS confidence 















































































   2.......10.........20...
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQ
Query Conservation           
    
  

 
  

    
  
  
 
   


  
 

    
 

  


  
  
 

 
  
   
Alig confidence  ..............................................
































.
Template Conservation  ..............................................    
                            .
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL.
Template Known Secondary structure  ..............................................SS

S


TT

TT.
Template Predicted Secondary structure  ..............................................


















.
Template SS confidence 















































































   24.....30.........40.........50......
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  SVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKD
Query Conservation         





  
 

   
  
  




 


 

 
 

   


 


 

  
          


 


 
Alig confidence  ..................


















..........
































Template Conservation  ..................                   ..........                         
    
 
Template Sequence  . . . . . . . . . . . . . . . . . . DTAGMRTGEGFLCVFAINN. . . . . . . . . . SKSFADINLYREQIKRVKDSDDVPMVLVGNKCD
Template Known Secondary structure  ..................



TT
STT
..........T
S



TT
Template Predicted Secondary structure  ..................











..........
















Template SS confidence 















































































   57..60.........70..... ....80.........90.........100........
 
   278.280.........290.........300.........310.........320.........330.........340.........350.
Predicted Secondary structure 






















Query SS confidence 









































































Query Sequence  LLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
Query Conservation 

  

    
   



 
           
   
        
    
 
 
 

  
  
   
   
   
Alig confidence 
.................



















..........

























Template Conservation   .................                    ..........  
 




 

 
 
  
   
   
Template Sequence  L. . . . . . . . . . . . . . . . . PTRTVDTKQAHELAKSYGIP. . . . . . . . . . FIETSAKTRQGVEDAFYTLVREIRQY
Template Known Secondary structure 
.................S


S
T

..........

TTT
TT
Template Predicted Secondary structure  .................






..........






Template SS confidence 









































































   120 .........130.........140 .........150.........160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions