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Job DescriptionP50148
Confidence98.66%DateThu Apr 26 09:30:17 BST 2012
Rank48Aligned Residues183
% Identity21%Templatec1skqB_
PDB info PDB header:translationChain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  RRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREV
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Template Sequence  KPHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEEMR. . . . . . . . . . . . . . . .
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   4.....10.........20.........30.........40.........50.........60.......
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  DVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDL
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   7980.
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  QSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKK
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Template Sequence  KKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKK. GEYEAGMSVEGQTREHIILAK. . . . . . TMGLDQLIVAVNKM
Template Known Secondary structure  SS

TTSTTSSS

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   82.......90.........100.........110......... 120.........130.........140 .........150....
 
   277..280.........290.........300.........310.........320. ........330.......
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Query Sequence  DLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSD. . . KIIYSHFTCATDTENI
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Template Sequence  DL. . . . . . . . . . . . . . . . . . TEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNI
Template Known Secondary structure  GG..................SSSTT
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   155. ...160.........170.........180.........190.........200
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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