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Job DescriptionP50148
Confidence98.12%DateThu Apr 26 09:30:17 BST 2012
Rank108Aligned Residues172
% Identity16%Templatec2xtnA_
PDB info PDB header:immune systemChain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of gtp-bound human gimap2, amino acid2 residues 1-234
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  ELRIILVGKTGTGKSAAGNSI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSTTSS...........................................................
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   22.......30.........40..
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LRKQAFESKLGS. . . QTLTKTCSKSQGSWGN
Template Known Secondary structure  .................................................TS

S




S...S



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TT
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   43......50.... .....60.........70
 
   199200........ .210.........220.........230.........240.........250.........260.......
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Query Sequence  VIFRMVDVGG. . . . . . . . . . . QRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNS
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Template Sequence  REIVIIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQ. . . . . . . . . DQQAAQRVKEIFGEDAMG. .
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STTSSS


TTTT

STT


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TTGGG..
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   71........80.........90.........100.........110.........120. ........130.........
 
   268.270.........280.........290.........300.........310.........320........ .330.........340...
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Query Sequence  SVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHF. . . . TCATDTENIRFVFAA
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Template Sequence  HTIVLFTHKED. . . . . . . . . . . . . . . . . . . . LGSLMDYMHDSDNKALSKLVAACGGRICAFNNRAEGSNQDDQVKELMDC
Template Known Secondary structure  G
GGG....................





TTT

TT

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   140.........150 .........160.........170.........180.........190.........
 
   344.....350..
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Query Sequence  VKDTILQLN
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Template Sequence  IEDLLMEKN
Template Known Secondary structure  TT
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   202.......210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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