Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence98.74%DateThu Apr 26 09:30:17 BST 2012
Rank43Aligned Residues176
% Identity22%Templated1kmqa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  RKKLVIVGDGACGKTCLLIVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   5....10.........20.....
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SKDQFPEVYVPTVFENYVADIEVDGKQVELAL. . .
Template Known Secondary structure  .............................................S


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   26...30.........40.........50.......
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  VIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL
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Template Sequence  . . . . . WDTAGLEDYDRLRPLSYPDTDVILMCFSIDS. . . . . . . . . . . PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL
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SGGGTTTGGGG
TT
STT
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GGG
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   58.60.........70.........80........ .90.........100.........110.........120.
 
   279280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  LEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  RNDEHTRRELAKM. . . . KQEPVKPEEGRDMANRI. . . . . . . . . GAFGYMECSAKTKDGVREVFEMATRAALQ
Template Known Secondary structure  TT
T....T




T.........T
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TTT
TT
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   122.......130.... .....140.........150. ........160.........170.........180
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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