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Job DescriptionP50148
Confidence98.75%DateThu Apr 26 09:30:17 BST 2012
Rank41Aligned Residues157
% Identity20%Templatec2ywfA_
PDB info PDB header:translationChain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  DARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVR
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Template Sequence  EQKNVRNFCIIAHVDHGKSTLADRLLEYTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGG
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   2.......10.........20.........30.
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  EVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AIGITVKMQAVRM
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S
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   32.......40....
 
   195. ...200.........210.........220.........230.........240.........250.........260.........
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Query Sequence  DL. . . . . QSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSV
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Template Sequence  FYKAKDGNTYKLHLIDTPGHVDFSYEVSRALAACEGALLLIDASQ. . . . . . . . . . . GIEAQTVANFWKAVE. . . . QDLVI
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SGGGT
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   64.....70.........80.........90.........100........ .110.........120... .....
 
   270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  ILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI
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Template Sequence  IPVINKIDL. . . . . . . . . . . . . . . . . . . PSADVDRVKKQIEEVLGLDPEE. . . . . . AILASAKEGIGIEEILEAIVNRI
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   129130....... ..140.........150......... 160.........170.........180..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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