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Job DescriptionP50148
Confidence98.76%DateThu Apr 26 09:30:17 BST 2012
Rank40Aligned Residues142
% Identity20%Templatec2e87A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein ph1320; PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TQQDVLRVRVP. . TTGIIEYPFDLQSVIFRMVDVGG. . . . . . . . . QRSERRKWIHCFENVTSIMFLVALSEYDQVLVESD
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Template Sequence  TTAKPEIASYPFTTRGINVGQFEDGYFRYQIIDTPGLLDRPISERNEIEKQAILALRYLGNLIIYIFDPSE. . . . . . . . H
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   188.190.........200.........210.........220.........230.........240.........250........ .
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  NENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKI
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Template Sequence  CGFPLEEQIHLFEEV. . HGEFKDLPFLVVINKIDV. . . . . . . . . . . . . . . . . . . . . ADEENIKRLEKFVKEKGLN. . . . .
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   260.........270.... .....280.........290.. .......300.........310.
 
   324.....330.........340.........350....
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Query Sequence  IYSHFTCATDTENIRFVFAAVKDTILQLNLK
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Template Sequence  . . PIKISALKGTGIDLVKEEIIKTLRPLAEK
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   312.......320.........330.........340
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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