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Job DescriptionP50148
Confidence98.51%DateThu Apr 26 09:30:17 BST 2012
Rank61Aligned Residues155
% Identity20%Templatec3bwdD_
PDB info PDB header:plant proteinChain: D: PDB Molecule:rac-like gtp-binding protein arac6; PDBTitle: crystal structure of the plant rho protein rop5
Resolution1.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
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Template Sequence  RFIKCVTVGDGAVGKTCLLISY. . TSNT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   5....10.........20...... ...30
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQ
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B
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   31...
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  SVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKD
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Template Sequence  ANVVLGLWDTAGEDYNRLRPLSYRGADVFILAFSLIS. . . . . . . . . . . KASYENVSKKWIPELKHYAPGVPIVLVGTKLD
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TTTTTGGGGGTT
STT
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TT


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   45....50.........60.........70.........80. ........90.........100.........110...
 
   278.280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  LLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  LRDDKQFFIDHAV. . . . . . . . PITTVQGEELKKLI. . . . . . . . . GAPAYIECSSKSQENVKGVFDAAIRVVLQ
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   122.......130.... .....140........ .150.........160.........170.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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