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Job DescriptionP50148
Confidence98.89%DateThu Apr 26 09:30:17 BST 2012
Rank35Aligned Residues177
% Identity15%Templatec1gwnA_
PDB info PDB header:gtpaseChain: A: PDB Molecule:rho-related gtp-binding protein rhoe; PDBTitle: the crystal structure of the core domain of rhoe/rnd3 - a2 constitutively activated small g protein
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  KCKIVVVGDSQCGKTALLHVF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   23......30.........40...
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AKDCFPENYVPTVFENYTASFEIDT. . . . . . . . QR
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   44.....50.........60........ .70
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  VIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL
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Template Sequence  IELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISR. . . . . . . . . . . PETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL
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SGGGTTTGGGG
TT
STT
...........T
TT

GGG
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   71........80.........90.........100...... ...110.........120.........130.........
 
   279280.........290.........300.........310.........320.........330...... ...340.........350.
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Query Sequence  LEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTEN. IRFVFAAVKDTILQL
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Template Sequence  RTDVSTLVELSNH. . . . RQTPVSYDQGANMAKQI. . . . . . . . . GAATYIECSALQSENSVRDIFHVATLACVNK
Template Known Secondary structure  GG
TT....T




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TTT

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   140.........150.. .......160......... 170.........180.........190.........200
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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