Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence98.29%DateThu Apr 26 09:30:17 BST 2012
Rank83Aligned Residues131
% Identity11%Templatec1mkyA_
PDB info PDB header:ligand binding proteinChain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210..... ....220.........230.........240.........250.........260....
Predicted Secondary structure 












.










Query SS confidence 





























.
















































Query Sequence  TTGIIEYPFDLQSVIFRMVDVGGQRSERRK. WIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWF
Query Conservation 
 

 
  
          





  
 
.
   
  
  




 


 

 
 

   


 


 

  
      
Alig confidence 





























.


















...........














....
Template Conservation 
                
 

 
               


 
 
 
   ...........     
         ....
Template Sequence  SPIPVDDEVFIDGRKYVFVDTAGLEKYSNYRVVDSIEKADVVVIVLDATQ. . . . . . . . . . . GITRQDQRXAGLXER. . . .
Template Known Secondary structure 





TTSS
S



S


STTT...........


....
Template Predicted Secondary structure 






















...........


....
Template SS confidence 















































































   209210.........220.........230.........240.........250........ .260.........270...
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  QNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAV
Query Conservation      


 


 


  

    
   



 
           
   
        
    
 
 
 

  
  
   
Alig confidence 

















................





















.....


















Template Conservation     
 


 

 

    ................                      .....
  



 
 

  
    
Template Sequence  RGRASVVVFNKWDLVVHR. . . . . . . . . . . . . . . . EKRYDEFTKLFREKLYFIDYSP. . . . . LIFTSADKGWNIDRXIDAX
Template Known Secondary structure  TT

GGGSTTG................GG

GGGTTS
.....
BTTTTBS
Template Predicted Secondary structure 











................




.....





Template SS confidence 















































































   291........300........ .310.........320.........330 .........340.........
 
   345....350..
Predicted Secondary structure 
Query SS confidence 







Query Sequence  KDTILQLN
Query Conservation     
    
Alig confidence 







Template Conservation          
Template Sequence  NLAYASYT
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions