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Job DescriptionP50148
Confidence97.28%DateThu Apr 26 09:30:17 BST 2012
Rank198Aligned Residues113
% Identity28%Templatec3t5dC_
PDB info PDB header:signaling proteinChain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of septin 7 in complex with gdp
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  EFTLMVVGESGLGKSTLIN. . . SLFL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   31........40......... 50...
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TDLIKKTVQVEQSKVLIKEV. . . . . . . . Q
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   54.....60.........70... .
 
   199200........ .210.........220.. .......230.........240.........250.
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Query Sequence  VIFRMVDVGG. . . . . . QRSERRKWIHCFEN. . . . . . . . . . . . . . . . . . . . . VTSIMFLVALSEYDQVLVESDNENRMEES
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Template Sequence  LLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSG. . . . . . . . . . HGLKPLD
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   88.90.........100.........110.........120.........130.........140.........150 .......
 
   252.......260.........270.........280..
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Query Sequence  KALFRTIITYPWFQNSSVILFLNKKDLLEEK
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Template Sequence  IEFMKRLHEK. . . . . VNIIPLIAKADTLTPE
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   158.160....... ..170.........180...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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