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Job DescriptionP50148
Confidence98.00%DateThu Apr 26 09:30:17 BST 2012
Rank126Aligned Residues169
% Identity21%Templatec3regA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho-like small gtpase; PDBTitle: crystal structure of ehrho1 bound to a gtp analog and magnesium
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  RRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREV
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Template Sequence  KKALKIVVVGDGAVGKTCLLLAFSK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   18.20.........30.........40..
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  DVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GEIPTAYVPTVFENFSHVMKYKNEEFILHL.
Template Known Secondary structure  .................................................S


SS



STT.
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   43......50.........60.........70..
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  QSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKK
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Template Sequence  . . . . . . . WDTAGQEEYDRLRPLSYADSDVVLLCFAVNN. . . . . . . . . . . RTSFDNISTKWEPEIKHYIDTAKTVLVGLKV
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SGGGTTTGGGG
TT
STT
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TTS
G
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   73......80.........90.........100... ......110.........120.........130....
 
   277..280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  DLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
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Template Sequence  DL. . . . . . . . . . . . . . . . . . . RKDGSDDVTKQEGDDLCQKLG. . . . CVAYIEASSVAKIGLNEVFEKSVDCIFSN
Template Known Secondary structure  GG...................

TTTT


T....
S

BTTTTBS
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   135. ...140.........150....... ..160.........170.........180......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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