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Job DescriptionP50148
Confidence97.74%DateThu Apr 26 09:30:17 BST 2012
Rank164Aligned Residues182
% Identity18%Templatec2wsmB_
PDB info PDB header:metal binding proteinChain: B: PDB Molecule:hydrogenase expression/formation protein (hypb); PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
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Query Sequence  RINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKI
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Template Sequence  AENKRLAEKNREALRE. SGTVAVNIMGAIGSGKTLLIERTIERIGN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .TT

TTS
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   12.......20....... ..30.........40.........50......
 
   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  PYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDV
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Template Sequence  . . . EVKIGAMLGDAEAISTGKECHLDAHMIYHRLKKFSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ...TS






TT
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TGGGTT.........................................
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   57..60.........70.........80.........90..
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  LRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTII
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Template Sequence  . . . . . . . . . . . . . . . . . . . CDLLLIENVGNL. . . ICPVDFDLGENYRVVMVSVTEGDDVVEKH. . . . . . . . . . . . . . . . .
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S
S...SGGGG


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SGGG
TT
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   109110.........120 .........130.........140.........
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  TYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRF
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Template Sequence  . . PEIFRVADLIVINKVALAEAV. . . . . . . . . . . . . . . . GADVEKMKADAKLI. . . . . . . . NPRAKIIEMDLKTGKGFEE
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GGG................T

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TTSBTTTTBS
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   150.........160.........170 .........180.... .....190.........200...
 
   340.....
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Query Sequence  VFAAVK
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Template Sequence  WIDFLR
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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