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Job DescriptionP50148
Confidence98.79%DateThu Apr 26 09:30:17 BST 2012
Rank38Aligned Residues172
% Identity20%Templatec2bvnB_
PDB info PDB header:elongation factorChain: B: PDB Molecule:elongation factor tu; PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic2 enacyloxin iia
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  RDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLV
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Template Sequence  ERTKPHVNVGTIGHVDHGKTTLTAAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   6...10.........20.........30.
 
   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  REVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TTVLAKTYGARGITINTSHVE
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TTTTSTT
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   32.......40.........50..
 
   194.....200.........210.........220.........230.........240.........250.........260.........270...
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Query Sequence  FDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFL
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Template Sequence  YDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATD. . . . . . . . GPMPQTREHILLGR. . . . . . QVGVPYIIVFL
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SGGGTT
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   6970.........80.........90.........100......... 110.........120... ......130....
 
   274.....280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  NKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  NKCDM. . . . . . . . . . . . . . . . . . VDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAG
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   135.... 140.........150.........160.........170.........180.........190...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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