Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence98.08%DateThu Apr 26 09:30:17 BST 2012
Rank115Aligned Residues138
% Identity19%Templatec2j3eA_
PDB info PDB header:protein transportChain: A: PDB Molecule:t7i23.11 protein; PDBTitle: dimerization is important for the gtpase activity of2 chloroplast translocon components attoc33 and pstoc159
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
Predicted Secondary structure 















Query SS confidence 















































































Query Sequence  RRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLK
Query Conservation     
  

  
  

       





 







 





    

  
       
  

      

       
Alig confidence 






































...




.................................
Template Conservation        
   
  
         
 


 

 






... 
 
 .................................
Template Sequence  AATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVN. . . SLIGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

STTSS...SS.................................
Template Predicted Secondary structure 









...

.................................
Template SS confidence 















































































   16...20.........30.........40.........50.... .....
 
   99100.........110.........120.........130.........140.........150.........160.........170........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  IPYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQD
Query Conservation                              
    
  

 
  

    
  
  
 
   


  
 

    
 

  
Alig confidence  ..................................................................










...
Template Conservation  ..................................................................           ...
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QVVRVSPFQAE. . .
Template Known Secondary structure  ..................................................................S
S


S

S
...
Template Predicted Secondary structure  ..................................................................










...
Template SS confidence 















































































   60.........70
 
   179180.........190.........200........ .210.........220.. .......230.........240.........
Predicted Secondary structure 











....




.....






Query SS confidence 





























. . . .













. . . . .


























Query Sequence  VLRVRVPTTGIIEYPFDLQSVIFRMVDVGG. . . . QRSERRKWIHCFEN. . . . . VTSIMFLVALSEYDQVLVESDNENRME
Query Conservation 

  
  
 

 
  
          



....

  
 

   
  .....
  




 


 

 
 

   


 
Alig confidence  .......






















....













.....














.......




Template Conservation  .......
              
 





  
           
   
       

 

       .......     
Template Sequence  . . . . . . . GLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYAV. . . . . . . DELDK
Template Known Secondary structure  .......

S
TT


SB
SSSB
TSS

B
TT



.......
T
Template Predicted Secondary structure  .......























.......
Template SS confidence 















































































   71........80.........90.........100.........110.........120.........130. .....
 
   250.........260.........270.......
Predicted Secondary structure 






Query SS confidence 



























Query Sequence  ESKALFRTIITYPWFQNSSVILFLNKKD
Query Conservation 


 

  
          


 


 
Alig confidence 















..









Template Conservation       
    
     ..  
 
 

 
Template Sequence  QVVIAITQTFGKEIWC. . KTLLVLTHAQ
Template Known Secondary structure  S
..T
TT
Template Predicted Secondary structure 


..

Template SS confidence 



























   137..140.........150.. .......160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions