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Job DescriptionP50148
Confidence97.80%DateThu Apr 26 09:30:17 BST 2012
Rank158Aligned Residues148
% Identity18%Templatec3q85B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:gtp-binding protein rem 2; PDBTitle: crystal structure of rem2 g-domain -gtp analog complex
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   40.........50.........60.........70.........80.........90.........100.........110.........
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Query Sequence  LKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVE
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Template Sequence  FKVMLVGESGVGKSTLAGTFG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   116...120.........130......
 
   120.........130.........140.........150.........160.........170.........180.........190.........
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Query Sequence  KVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLDTYERRIMVDKE
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TT
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   137..140.........150
 
   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  IFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLL
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Template Sequence  EVTLIVYDIWEQLQDHCLQTGDAFLIVFSVTDRRS. . . . . . . . . . . . . FSKVPETLLRLRAGRPHHDLPVILVGNKSDLA
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TT
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G
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   163......170.........180.........190....... ..200.........210.........220.........
 
   280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  EEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
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Template Sequence  RSR. . . . . . . . . . . . . . . . EVSLEEGRHLAGT. . . . . . . . . . LSCKHIETSAALHHNTRELFEGAVRQIRLR
Template Known Secondary structure  GG
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S
..........TT

BTTTTBST
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   236.. .240.........250. ........260.........270.........280.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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