Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence99.56%DateThu Apr 26 09:30:17 BST 2012
Rank27Aligned Residues127
% Identity26%Templatec3o47A_
PDB info PDB header:hydrolase, hydrolase activatorChain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp- PDBTitle: crystal structure of arfgap1-arf1 fusion protein
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  VPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPW
Query Conservation    
 

 
  
          





  
 

   
  
  




 


 

 
 

   


 


 

  
     
Alig confidence 























.....





















..........


















Template Conservation   

 


 
 
      
 


  .....
 

  

  
  





 

..........          
  

    
Template Sequence  IPTIGFNVETVEYKNISFTVWDVG. . . . . RPLWRHYFQNTQGLIFVVDSND. . . . . . . . . . RERVNEAREELMRMLAEDE
Template Known Secondary structure  TTTT

.....

STTTT
..........SSST
GG
Template Predicted Secondary structure 









.....








..........


Template SS confidence 















































































   176...180.........190......... 200.........210.........220. ........230.........240
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  FQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAA
Query Conservation       


 


 


  

    
   



 
           
   
        
    
 
 
 

  
  
   
Alig confidence 














..................









.....































Template Conservation      




 

 

..................       

 .....  
 
  
      
  


  



 
 
 
Template Sequence  LRDAVLLVFANKQDL. . . . . . . . . . . . . . . . . . PNAMNAAEIT. . . . . DKLGLHSLRHRNWYIQATCATSGDGLYEGLDW
Template Known Secondary structure  GTT

TTS..................TT


.....T
TT

SS

BTTTTBT
Template Predicted Secondary structure 







..................




.....











Template SS confidence 















































































   246...250.........260 .........270 .........280.........290.........300..
 
   344....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  VKDTI
Query Conservation 
   
Alig confidence 




Template Conservation 
   
Template Sequence  LSNQL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   303....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions