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Job DescriptionP50148
Confidence98.33%DateThu Apr 26 09:30:17 BST 2012
Rank80Aligned Residues162
% Identity19%Templatec3gehA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30 .........40.........50.........60.........70.........80.........90...
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Query Sequence  KEARRINDEIERQLR. . RDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRA
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Template Sequence  SDIENIAAEISQLLATKDKGELLRTGLKVAIVGRPNVGKSSLLNAW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . S
Template Known Secondary structure  TTT

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   196...200.........210.........220.........230.........240. .
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  MDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYL
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Template Sequence  QSDRAIVTDLPGT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  BS

S

TT
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   243......250.....
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  PTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKA
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Template Sequence  . . . . . . . . . . . . TRDVVESQLVVGGIPVQVLDQAA. . . . . . . . . . . . NTADLVLLTIDAAT. . . . . . . . . . . GWTTGDQE
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TT




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S
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S
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   256...260.........270........ .280.........290.. .......300
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  LFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATD
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Template Sequence  IYEQV. . . . . . KHRPLILVMNKIDLVEKQLI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TSLEYPENITQIVHTAAAQ
Template Known Secondary structure  ......TTS

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GGGS..............................TT



TT


BTTT
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   321.... ....330.........340..... ....350.........360....
 
   334.....340........
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Query Sequence  TENIRFVFAAVKDTI
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Template Sequence  KQGIDSLETAILEIV
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   365....370.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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