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Job DescriptionP50148
Confidence98.10%DateThu Apr 26 09:30:17 BST 2012
Rank110Aligned Residues192
% Identity20%Templatec1g7cA_
PDB info PDB header:translationChain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  RRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREV
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Template Sequence  KSHINVVVIGHVDSGKSTTTGHL. IYKCGGIDKRTIEKFEKEA. . . . . . . . . . . . . . . . . . . . AELGKGSFKYAWVLDKL
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TTS
.S
SSG....................GGGSSS


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   5....10.........20....... ..30.........40...... ...50.........60...
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  DVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDL
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Template Sequence  KAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RERGITIDIALWKFET
Template Known Secondary structure  .............................................................T


S
S

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   64.. ...70.........80..
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  QSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKK
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Template Sequence  PKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGV. GEFEAGISKDGQTREHALLAF. . . . . . TLGVRQLIVAVNKM
Template Known Secondary structure  SS



TTSSS

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S.T
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   83......90.........100.........110.........120 .........130.........140. ........150.....
 
   277..280.........290.........300.........310........ .320.........330.......
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Query Sequence  DLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNP. . . DSDKIIYSHFTCATDTENI
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Template Sequence  DS. . . . . . . . . . . . . . . . . . . . VKWDESRFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNM
Template Known Secondary structure  TT....................TTT
T

GGG



TTT
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   156. ..160.........170.........180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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