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Job DescriptionP50148
Confidence98.34%DateThu Apr 26 09:30:17 BST 2012
Rank77Aligned Residues151
% Identity23%Templatec2x77B_
PDB info PDB header:gtp-binding proteinChain: B: PDB Molecule:adp-ribosylation factor; PDBTitle: crystal structure of leishmania major adp ribosylation2 factor-like 1.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  RRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREV
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Template Sequence  DRKIRVLMLGLDNAGKTSILY. . RLHLGD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TTSS..T
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   18.20.........30........ .40....
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  DVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VV
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   45.
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  QSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKK
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Template Sequence  TTNLETLQYKNISFEVWDLGGCYFSDTDAVIYVVDSTD. . . . . . . . . . RDRMGVAKHELYALLDEDELRKSLLLIFANKQ
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TT



TTTT

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..........GGGT
GGGTT

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   47..50.........60.........70.........80.... .....90.........100.........110......
 
   277..280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  DLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
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Template Sequence  DL. . . . . . . . . . . . . . . . . . PDAASEAEIA. . . . . EQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLREQ
Template Known Secondary structure  TS..................SS


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   132. ......140... ......150.........160.........170.........180...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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