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Job DescriptionP50148
Confidence97.15%DateThu Apr 26 09:30:17 BST 2012
Rank208Aligned Residues171
% Identity16%Templatec4dheA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of a probable gtp-binding protein engb from2 burkholderia thailandensis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
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Template Sequence  VQPEIAFAGRSNAGKSTAINVLC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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S
S
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   24.....30.........40......
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NQKRLAFASKTPGRTQHINYFSVGPA. . . . . . . . A
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S


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T........T
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   47..50.........60.........70.. .
 
   198.200........ .210.........220.........230.........240.........250.........260.......
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Query Sequence  SVIFRMVDVGG. . . . . . . . . . QRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNS
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Template Sequence  EPVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDAR. . . . . . . . . . . . RPLTELDRRMIEWFAPTGK
Template Known Secondary structure  S
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SS


ST
TTTT............S


GGG

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   74.....80.........90.........100.........110.........120.. .......130.........140.
 
   268.270.........280.........290.........300.........310........ .320.........330.........340......
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Query Sequence  SVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNP. DSDKIIYSHFTCATDTENIRFVFAAVKD
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Template Sequence  PIHSLLTKCDK. . . . . . . . . . . . . . . . . . LTRQESINALRATQKSLDAYRDAGYAGKLTVQLFSALKRTGLDDAHALIES
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GGG..................S
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S
BTTTTBS
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   142.......150.. .......160.........170.........180.........190.........200...
 
   347.
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Query Sequence  TI
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Template Sequence  WL
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   204.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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