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Job DescriptionP50148
Confidence97.07%DateThu Apr 26 09:30:17 BST 2012
Rank212Aligned Residues170
% Identity23%Templatec2fv8A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho-related gtp-binding protein rhob; PDBTitle: the crystal structure of rhob in the gdp-bound state
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  RKKLVVVGDGACGKTCLLI. . VFSKDE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   5....10.........20... ......
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FPFENYVADIEVDGKQ
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   30.........40.....
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  VIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL
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Template Sequence  VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDS. . . . . . . . . . . PDSLENIPEKWVPEVKHFCPNVPIILVANKKDL
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TTTGGGG
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GGG
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   53......60.........70.........80........ .90.........100.........110.........120.
 
   279280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  LEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
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Template Sequence  RSDEHVRTELARMKQ. . . . EPVRTDDGRAMAVR. . . . . . . . . IQAYDYLECSAKTKEGVREVFETATRAALQK
Template Known Secondary structure  GG
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   122.......130...... ...140.........150 .........160.........170.........180.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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