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Job DescriptionP50148
Confidence99.35%DateThu Apr 26 09:30:17 BST 2012
Rank28Aligned Residues133
% Identity11%Templatec3l82B_
PDB info PDB header:cell cycleChain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210... ......220.........230.........240.........250......
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Query Sequence  VPTTGIIEYPFDLQSVIFRMVDVGGQRSER. . . . . . . RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFR
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Template Sequence  CPTAGLPQRQIDGIGSGVN. FQLNNQHKFNILILYSTPQIQKVCEVVDGFIYVANAEA. . . . . . . . . . HKRHEWQDEFSH
Template Known Secondary structure 



GGG

TTS


.SSSS

S




S
BT..........T



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   204.....210.........220.. .......230.........240.........250.........260 .........270..
 
   257.. 260.........270.... .....280.........290.........300.........310.........320.........330..
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Query Sequence  TII. . . TYPWFQNSSVILFLN. KKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCAT
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Template Sequence  IXAXTDPAFGSSGRPLLVLSCISQGD. . . . . . . . . . . . . . . . . . VKRXPCFYLA. . . . . HELHLNLL. NHPWLVQDTEAE
Template Known Secondary structure  S
TTSS
S
S
SSTT..................S
B

.....TTGGGG.
S
TT
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   310.........320.........330..... ....340..... ....350... ......360.....
 
   333......340.........350.
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Query Sequence  DTENIRFVFAAVKDTILQL
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Template Sequence  TLTGFLNGIEWILEEVESK
Template Known Secondary structure  T
TTTTTTTT
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   366...370.........380....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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