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Job DescriptionP50148
Confidence97.92%DateThu Apr 26 09:30:17 BST 2012
Rank142Aligned Residues170
% Identity19%Templatec2j0vD_
PDB info PDB header:nucleotide-binding proteinChain: D: PDB Molecule:rac-like gtp-binding protein arac7; PDBTitle: the crystal structure of arabidopsis thaliana rac7-rop9:2 the first ras superfamily gtpase from the plant kingdom
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
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Template Sequence  KFIKCVTVGDGAVGKTCMLI. . CYTSNK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   5....10.........20.... .....30
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FPTDYIP. . . . . . . . . . . TVFDNFSANVAV
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   31...... ..40.........
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  SVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKD
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Template Sequence  DGQIVNLGLWDTAGQEDYRPLSYRGADIFVLAFSLIS. . . . . . . . . . . KASYENVLKKWMPELRRFAPNVPIVLVGTKLD
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GGGTT
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   50.........60.........70.........80...... ...90.........100.........110........
 
   278.280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  LLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  LRDDKGYLADHTN. . . . . . . . VITSTQGEELRKQI. . . . . . . . . GAAAYIECSSKTQQNVKAVFDTAIKVVLQ
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   122.......130.... .....140........ .150.........160.........170.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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