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Job DescriptionP50148
Confidence97.98%DateThu Apr 26 09:30:17 BST 2012
Rank134Aligned Residues111
% Identity20%Templatec3lxwA_
PDB info PDB header:immune systemChain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  KLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEK
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Template Sequence  RLILVGRTGAGKSATGN. . . SILG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSTTSS...T........................................................
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   2930.........40..... ....
 
   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  VSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSVI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QRRFTRACTTGSRRWDKCH
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   50.........60........
 
   201........210. ........220.........230.........240.........250.........260........
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Query Sequence  FRMVDVGGQRS. . . . . . . . . . . . ERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSS
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Template Sequence  VEVVDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQ. . . . . . . . . DQQAVRQVRDMFGEDVLK. . W
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SSTTSTTSTT

STTB

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GGGGG..G
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   78.80.........90.........100.........110.........120....... ..130.........140..... .
 
   269270.........280..
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Query Sequence  VILFLNKKDLLEEK
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Template Sequence  MVIVFTRKEDLAGG
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GGGGTT
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   147..150.........160
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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