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Job DescriptionP50148
Confidence97.65%DateThu Apr 26 09:30:17 BST 2012
Rank176Aligned Residues135
% Identity13%Templatec1s0uA_
PDB info PDB header:translationChain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  ARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVRE
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Template Sequence  SQAEVNIGMVGHVDHGKTSLTKALTGVWTDRGISIRLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   34.....40.........50.........60.........70.
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  VDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YADCEIRKCPQCGTYTTKPRCPNCLAET
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TTT

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B
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   7980.........90.........100......
 
   196...200.........210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  LQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNK
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Template Sequence  EFLRRVSFVDSPGHETLMATMLSGASLMDGAILVIAANE. . . . . . . PCPQPQTKEHLMALE. . . . . . ILGIDKIIIVQNK
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   107..110.........120.........130.........140..... ....150.........160 .........170...
 
   276.
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Query Sequence  KD
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Template Sequence  ID
Template Known Secondary structure  TT
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   174.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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