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Job DescriptionP50148
Confidence97.81%DateThu Apr 26 09:30:17 BST 2012
Rank156Aligned Residues105
% Identity21%Templatec1zn0B_
PDB info PDB header:translation/biosynthetic protein/rnaChain: B: PDB Molecule:elongation factor g; PDBTitle: coordinates of rrf and ef-g fitted into cryo-em map of the2 50s subunit bound with both ef-g (gdpnp) and rrf
Resolution15.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  DARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVR
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Template Sequence  DLKRLRNIGIAAHIDAGKTTTTERILYYTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGSTTSSTT..................................................
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   8.10.........20.........30.......
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  EVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RIAVTTC
Template Known Secondary structure  .........................................................................SB
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   38.40....
 
   195....200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  DLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLN
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Template Sequence  FWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQ. . . . . . . . . . . GVEPQSETVWRQAEKYK. . . . VPRIAFAN
Template Known Secondary structure  TT


SSTT

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   73......80.........90.........100.........110.. .......120......... 130.......
 
   275..
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Query Sequence  KKD
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Template Sequence  KMD
Template Known Secondary structure 
TT
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   138.140
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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