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Job DescriptionP50148
Confidence99.27%DateThu Apr 26 09:30:17 BST 2012
Rank29Aligned Residues199
% Identity19%Templatec2wkqA_
PDB info PDB header:transferase, cell adhesionChain: A: PDB Molecule:nph1-1, ras-related c3 botulinum toxin substrate PDBTitle: structure of a photoactivatable rac1 containing the lov22 c450a mutant
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  AKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAM
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Template Sequence  DAAEREGVMLIKKTAENIDEAAKELIKCVVVGDGAVGKTCLLI. . SYTTNAFPG. . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
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Query Sequence  DTLKIPYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLP
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   574...
 
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Query Sequence  TQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKAL
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Template Sequence  TVFDNYSANVMVDGKP. . . . . . . . VNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVS. . . . . . . . . . PASFHHVRAK
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STT........


GGGTTTGGGG
TT
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   578.580.........590... ......600.........610.........620......... 630.........
 
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Query Sequence  FRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDT
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Template Sequence  WYPEVRH. HCPNTPIILVGTKLDLRDDKDTIEKLKEK. . . . . . KLTPITYPQGLAMAKEIGAVK. . . . . . . YLECSALTQ
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TTS

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   640...... ...650.........660.........670..... ....680.........690...... ...700.....
 
   335....340.........
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Query Sequence  ENIRFVFAAVKDTIL
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Template Sequence  RGLKTVFDEAIRAVL
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   706...710.........720
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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