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Job DescriptionP50148
Confidence98.29%DateThu Apr 26 09:30:17 BST 2012
Rank85Aligned Residues188
% Identity23%Templatec1xzqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EAKEARRINDEIERQLRRD. . . . . . KRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAM
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Template Sequence  NTGEVVTRLERIKEKLTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIP. . . . . . . . . . . . . . . .
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   180.........190.........200.........210.........220.........230.........240...
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  QAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRV
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   168.170.........180.........190.........200.........210... ......220.........230........
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Query Sequence  ADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSER. . . . . . . . . RKWIHCFENVTSIMFLVALSEYDQV
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Template Sequence  . . . . . . . . . . . . . . . . GTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLD.
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   244.....250.........260.........270.........280.........290.........300......
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  LVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNP
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Template Sequence  . . . . . . . . . . EEDRKILERIKNK. . . . . . RYLVVINKVDV. . . . . . . . . . . . . . . . . . VEKINEEEIKNKL. . . . . . . . .
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   307..310......... 320.........330 .........340...
 
   319320.........330.........340.........350.........
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Query Sequence  DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
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Template Sequence  . . GTDRHMVKISALKGEGLEKLEESIYRETQEIFERGSDSL
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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