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Job DescriptionP50148
Confidence98.03%DateThu Apr 26 09:30:17 BST 2012
Rank122Aligned Residues168
% Identity26%Templated2fn4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  ARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVRE
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Template Sequence  PSETHKLVVVGGGGVGKSALTIQFI. . . QSYF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS

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   26...30.........40.........50 ....
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  VDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VSDYDPTIEDSYTKICSVDGIPARLDI
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SS

TT

TT
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   55....60.........70.........80.
 
   196...200.........210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  LQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNK
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Template Sequence  . . . . . . . . LDTAGQEEFGAMREQYMRAGHGFLLVFAIND. . . . . . . . . . RQSFNEVGKLFTQILRVKDRDDFPVVLVGNK
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   82.......90.........100.........110.. .......120.........130.........140...
 
   276...280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  KDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
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Template Sequence  ADLESQR. . . . . . . . . . . . . . . . QVPRSEASAFGAS. . . . . . . . . . HHVAYFEASAKLRLNVDEAFEQLVRAVRKY
Template Known Secondary structure  GGGGGG
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S
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BTTTTBS
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   144.....150 .........160... ......170.........180.........190...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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