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Job DescriptionP50148
Confidence98.74%DateThu Apr 26 09:30:17 BST 2012
Rank42Aligned Residues150
% Identity14%Templatec3r7wC_
PDB info PDB header:protein transportChain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex
Resolution2.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   164.....170.........180.........190......... 200.........210...... ...220.........230.......
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Query Sequence  LDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSV. IFRMVDVGGQRSERRKW. . . . . IHCFENVTSIMFLVALSEYDQ
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Template Sequence  XRSIIFSNYSAFDTRRL. . . GATIDVEHSHLRFLGNXTLNLWDCGGQDVFXENYFTKQKDHIFQXVQVLIHVFDVES. . .
Template Known Secondary structure  S


TTGGGG
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STTT

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   22.......30........ .40.........50.........60.........70.........80.........90.....
 
   238.240.........250.........260.... .....270.........280.........290.........300.........310.....
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Query Sequence  VLVESDNENRMEESKALFRTIITYPWF. . QNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVD
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Template Sequence  . . . . . . . . TEVLKDIEIFAKALKQLRKYSPDAKIFVLLHKXDLVQLD. . . . . . . . . . . . . . . . . KREELFQIXXKNLSET
Template Known Secondary structure  ........TT
TT

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   96...100.........110.........120.........130.... .....140.........150
 
   316...320.........330.........340........
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Query Sequence  LNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI
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Template Sequence  SSEFGFPNLIGFPTSIWD. . . . ESLYKAWSQIV
Template Known Secondary structure  TTT

S

TTS....T
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   151........160........ .170.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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