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Job DescriptionP50148
Confidence98.58%DateThu Apr 26 09:30:17 BST 2012
Rank56Aligned Residues174
% Identity15%Templatec3c5hA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the ras homolog domain of human grlf12 (p190rhogap)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50 .........60.........70.........80.........90.........100......
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Query Sequence  ARRELKLLLLGTGES. . . . . . . . . GKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHN
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Template Sequence  FQGTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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S
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TTTTTT


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STTT
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   10.........20.........30.........40.........50
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  KAHAQLVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPT
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   51........60... ....
 
   187..190.........200.... .....210.........220....
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Query Sequence  TGIIEYPFDLQSVIFRMV. . . . . . . DVGGQRSERRKWIHCFENVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VNNDHFLYWGEVSKMHIVEQTEFIDDQTFQPHRSTALQPYIKRAAATKLASAEKLMYFCTDQLGLEQDFEQKQMPDGKLL
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TTT
SBTTGGG


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GGGTT
GGGS


B
GGG
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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   225....230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  . . SIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDA
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Template Sequence  VDGFLLGIDVS. . . . . . . . . . . . RNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDE. . . . . . . . . . . . . . . . . . . . . GVE
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TT


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   157..160....... ..170.........180.........190.........200 ...
 
   303......310.........320.........330.........340.........350
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Query Sequence  QAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  RYIRD. AHTFALSKKN. . . . . LQVVETSARSNVNVDLAFSTLVQLIDK
Template Known Secondary structure  .TSSS.....


BTTTTBS
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   208.210.. .......220.. .......230.........240.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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