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Job DescriptionP50148
Confidence97.32%DateThu Apr 26 09:30:17 BST 2012
Rank195Aligned Residues155
% Identity19%Templatec2j1lA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rho-related gtp-binding protein rhod; PDBTitle: crystal structure of human rho-related gtp-binding protein2 rhod
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
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Template Sequence  RSVKVVLVGDGGCGKTSLLMVF. . . ADTPT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   16...20.........30....... ..40..
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQ
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   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  SVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKD
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Template Sequence  . VFERYMVNLQVKGKPVHLHIWDTDASVLLLCFDVTS. . . . . . . . . . . PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD
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   50.........60.........70.........80..... ....90.........100.........110.......
 
   278.280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  LLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  LRKDKSLVNKLRRNGL. . . . EPVTYHRGQEMARSV. . . . . . . . . GAVAYLECSARLHDNVHAVFQEAAEVALS
Template Known Secondary structure  GGS
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   133......140........ .150.........160... ......170.........180.........190..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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