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Job DescriptionP50148
Confidence98.03%DateThu Apr 26 09:30:17 BST 2012
Rank121Aligned Residues123
% Identity20%Templatec3cb4D_
PDB info PDB header:translationChain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.........240.........250.........260.....
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Query Sequence  TTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQ
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Template Sequence  SVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQ. . . . . . . . . . . GVEAQTLANCYTA. . . . MEM
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   58.60.........70.........80.........90.........100...... ...110......... 120..
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  NSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVK
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Template Sequence  DLEVVPVLNKIDL. . . . . . . . . . . . . . . . . . . PAADPERVAEEIEDIVGIDATD. . . . . . AVRCSAKTGVGVQDVLERLV
Template Known Secondary structure  T

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   123......130..... ....140.........150....... ..160.........170.......
 
   346..
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Query Sequence  DTI
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Template Sequence  RDI
Template Known Secondary structure  S
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   178.180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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