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Job DescriptionP50148
Confidence98.60%DateThu Apr 26 09:30:17 BST 2012
Rank54Aligned Residues162
% Identity31%Templatec2h18A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:adp-ribosylation factor-like protein 8a; PDBTitle: structure of human adp-ribosylation factor-like 10b (arl10b)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  DKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQ
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Template Sequence  KALFWKEEMELTLVGLQYSGKTTFVNVI. . . ASGQFNE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS
STTSS...TTT

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   13......20.........30.........40 .......
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  LVREVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIE
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   48.50..
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  YPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVIL
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Template Sequence  RKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAAD. . . . . . . . . . QEKIEASKNELHNLLDKPQLQGIPVLV
Template Known Secondary structure  TTSS

TTT
STT
..........GGGT
GGGTT

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   58.60.........70.........80.........90.........100 .........110.........120.......
 
   272.......280.........290.........300.........310.........320.........330.........340......
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Query Sequence  FLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKD
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Template Sequence  LGNKRDL. . . . . . . . . . . . . . . . . . . PGALDEKE. . . . LIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQ
Template Known Secondary structure 
TTS...................TT


....TTGGG

SS

BTTTTBS
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   128.130.... .....140.. .......150.........160.........170.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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