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Job DescriptionP50148
Confidence96.66%DateThu Apr 26 09:30:17 BST 2012
Rank221Aligned Residues108
% Identity23%Templatec3agqA_
PDB info PDB header:translation,transferaseChain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii
Resolution3.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  DARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVR
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Template Sequence  RTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   292.......300.........310.........320.....
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  EVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPF
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   326...330..
 
   195....200.........210.........220.........230.... .....240.........250.........260........ .270.
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Query Sequence  DLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSE. . YDQVLVESDNENRMEESKALFRTIITYPWFQNSS. VIL
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Template Sequence  DTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQT. . . . . . . . . . REHILLGR. . . . . . . QVGVPYIIV
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   355....360.........370.........380.........390.........400 ........ .410.......
 
   272......
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Query Sequence  FLNKKDL
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Template Sequence  FLNKCDM
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TT
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   418.420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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