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Job DescriptionP50148
Confidence91.62%DateThu Apr 26 09:30:17 BST 2012
Rank395Aligned Residues86
% Identity14%Templatec4a2iV_
PDB info PDB header:ribosome/hydrolaseChain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
Resolution16.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  NVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRD
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Template Sequence  NIDQIVIVSAILP. . . . . . . ELSLNIIDRYLVGCE. . . . . . . TLQVEPLIVLNKIDL. . . . . . . . . . . . . . . . . . . LDDE
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STT.......T

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GGG...................

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   130.........140.. .......150....... ..160.........170.. ....
 
   302.......310.........320.........330.........340......
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Query Sequence  AQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKD
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Template Sequence  GMDFVNEQMDIYRNIGYR. . . . . . VLMVSSHTQDGLKPLEEALTG
Template Known Secondary structure  TTT

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BTTTTBTTT
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   177..180.........190.... .....200.........210.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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