Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence98.44%DateThu Apr 26 09:30:17 BST 2012
Rank66Aligned Residues171
% Identity20%Templated1vg8a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  LKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVE
Query Conservation   





 







 





    

  
       
  

      

                            
Alig confidence 





















..........................................................
Template Conservation   

 


   






  
  ..........................................................
Template Sequence  LKVIILGDSGVGKTSLMNQYVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TTSS..........................................................
Template Predicted Secondary structure 





..........................................................
Template SS confidence 















































































   10091010.........1020.........1030
 
   120.........130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSV
Query Conservation         
    
  

 
  

    
  
  
 
   


  
 

    
 

  


  
  
 

 
  
     
Alig confidence  ..............................................




























.....
Template Conservation  ..............................................         
                   .....
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KKFSNQYKATIGADFLTKEVMVDDRLVTM. . . . .
Template Known Secondary structure  ..............................................S


SS




SSSS
.....
Template Predicted Secondary structure  ..............................................


















.....
Template SS confidence 















































































   1031........1040.........1050.........
 
   200.........210.........220.........230.........240.........250.........260.........270.........
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  IFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLL
Query Conservation       





  
 

   
  
  




 


 

 
 

   


 


 

  
          


 


 


Alig confidence  ..




































.......
































.
Template Conservation  ..                                     .......                         

 

 
 .
Template Sequence  . . QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTF. . . . . . . KTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL.
Template Known Secondary structure  ..
SSGGGS
S

GGGTT
STT
.......T

SSGGGS

TTS.
Template Predicted Secondary structure  ..






























.......











.
Template SS confidence 















































































   1060.........1070.........1080.........1090...... ...1100.........1110.........1120.........
 
   280.........290.........300.........310.........320.........330.........340.........350....
Predicted Secondary structure 






















Query SS confidence 










































































Query Sequence  EEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLK
Query Conservation    

    
   



 
           
   
        
    
 
 
 

  
  
   
   
    
 
Alig confidence  ................















.........

































Template Conservation  ................                .........       
 


 
 

 


  
    
     
Template Sequence  . . . . . . . . . . . . . . . . ENRQVATKRAQAWCYS. . . . . . . . . KNNIPYFETSAKEAINVEQAFQTIARNALKQETE
Template Known Secondary structure  ................S


S
.........TTS


BTTTTBS
Template Predicted Secondary structure  ................

.........








Template SS confidence 










































































   1130.........1140..... ....1150.........1160.........1170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions