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Job DescriptionP50148
Confidence99.06%DateThu Apr 26 09:30:17 BST 2012
Rank33Aligned Residues154
% Identity25%Templatec2zejA_
PDB info PDB header:transferaseChain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  KLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEK
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Template Sequence  KLXIVGNTGSGKTTLLQQL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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S
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   1336...1340.........1350....
 
   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  VSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSVI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . XKTVGIDVKDWPI. . LV
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   1355....1360....... ..
 
   201........210.........220.........230.........240.........250.........260.........270.........280
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Query Sequence  FRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLE
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Template Sequence  LNVWDFAGREEFYSTHPHFXTQRALYLAVYDLSK. . . . . . . . . . GQAEVDAXKPWLFNI. KARASSSPVILVGTHLDV. .
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   1390.........1400.........1410.........1420... ......1430........ .1440.........1450......
 
   281........290.........300.........310.........320.........330.........340.........350...
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Query Sequence  EKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNL
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Template Sequence  . . . . . . . . . . . . . . . . . . . SDEKQRKACXSKITKELLNKRGFPAIR. DYHFVNATEESDALAKLRKTIINESL
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   1457..1460.........1470.........1480... ......1490.........1500.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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