Return to main results Retrieve Phyre Job Id

Job DescriptionP50148
Confidence98.00%DateThu Apr 26 09:30:17 BST 2012
Rank130Aligned Residues113
% Identity27%Templatec3i8sC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of the cytosolic domain of e. coli feob, nucleotide-free2 form
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
Query Conservation     





 







 





    

  
       
  

      

                          
Alig confidence 




















...........................................................
Template Conservation 
   
 
 
    






 ...........................................................
Template Sequence  KKLTIGLIGNPNSGKTTLFNQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TTSS...........................................................
Template Predicted Secondary structure 






...........................................................
Template SS confidence 















































































   2.......10.........20..
 
   118.120.........130.........140.........150.........160.........170.........180..... ....190.....
Predicted Secondary structure 






























..



Query SS confidence 



































































. .









Query Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVP. . TTGIIEYPFD
Query Conservation           
    
  

 
  

    
  
  
 
   


  
 

    
 

  


  
  ..
 

 
  
 
Alig confidence  ........................................................











..









Template Conservation  ........................................................
 
           
         
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTGSRQRVGNWAGVTVERKEGQFS
Template Known Secondary structure  ........................................................TT

TTSS
Template Predicted Secondary structure  ........................................................









Template SS confidence 















































































   23......30.........40......
 
   196...200.........210... ......220.........230.........240.........250.........260...
Predicted Secondary structure 








............










Query SS confidence 

















. . . . . . . . . . . .

















































Query Sequence  LQSVIFRMVDVGGQRSER. . . . . . . . . . . . RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPW
Query Conservation           





  
............ 

   
  
  




 


 

 
 

   


 


 

  
     
Alig confidence 

















............




















.................











Template Conservation         





                             

 
 
   .................            
Template Sequence  TTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASN. . . . . . . . . . . . . . . . . LERNLYLTLQLL
Template Known Secondary structure 
SS




S
S

SSS


T

SGGG.................
Template Predicted Secondary structure 






















.................


Template SS confidence 















































































   47..50.........60.........70.........80.........90....... ..100.........
 
   264.....270.........280..
Predicted Secondary structure 




Query SS confidence 


















Query Sequence  FQNSSVILFLNKKDLLEEK
Query Conservation       


 


 


  
Alig confidence 


















Template Conservation          



 
     
Template Sequence  ELGIPCIVALNMLDIAEKQ
Template Known Secondary structure  TT


T
Template Predicted Secondary structure 











Template SS confidence 


















   110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions