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Job DescriptionP50148
Confidence98.58%DateThu Apr 26 09:30:17 BST 2012
Rank57Aligned Residues123
% Identity19%Templatec2h5eB_
PDB info PDB header:translationChain: B: PDB Molecule:peptide chain release factor rf-3; PDBTitle: crystal structure of e.coli polypeptide release factor rf3
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  RDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLV
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Template Sequence  QEVAKRRTFAIISHPDAGKTTITEKVLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

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   8.10.........20.........30.....
 
   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  REVDVEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FGQTTSVMQ
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TT
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   36...40....
 
   194.....200.........210.........220.........230.........240.........250.........260.........270...
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Query Sequence  FDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFL
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Template Sequence  FPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAK. . . . . . . . . . . GVEDRTRKLMEVTRLRD. . . . TPILTFM
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STT

GGG
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S
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   77..80.........90.........100.........110....... ..120.........130.... .....140.
 
   274.....280.........290.........300.........310...
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Query Sequence  NKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMF
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Template Sequence  NKLDR. . . . . . . . . . . . . . . . . . . DIRDPMELLDEVENEL
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   142.... ...150.........160..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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