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Job DescriptionP50148
Confidence97.68%DateThu Apr 26 09:30:17 BST 2012
Rank170Aligned Residues169
% Identity24%Templatec2q3hA_
PDB info PDB header:structural genomicsChain: A: PDB Molecule:ras homolog gene family, member u; PDBTitle: the crystal structure of rhoua in the gdp-bound state.
Resolution1.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
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Query Sequence  LKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVE
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Template Sequence  VKCVLVGDGAVGKTSLVVSY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Query Sequence  KVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TTPTAFDNFSAVVSVDGRPV
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SSTT
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Query Sequence  IFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLL
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Template Sequence  RLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVS. . . . . . . . . . . PSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLR
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STT
SSSGGGGGTT
STT
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GGGG
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   98.100.........110.........120.........130.. .......140.........150.........160......
 
   280.........290.........300.........310.........320.........330.........340.........350..
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Query Sequence  EEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLN
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Template Sequence  EDVKVLIELDKCKE. . . . KPVPEEAAKLLAEEI. . . . . . . . . KAASYIECSALTQKNLKEVFDAAIVAGIQYS
Template Known Secondary structure  G
TTT
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S

TTT
TT
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   167..170.........180 .........190..... ....200.........210.........220......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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