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Job DescriptionP50148
Confidence98.21%DateThu Apr 26 09:30:17 BST 2012
Rank94Aligned Residues164
% Identity18%Templatec2g3yA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:gtp-binding protein gem; PDBTitle: crystal structure of the human small gtpase gem
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   40.........50.........60.........70.........80.........90.........100.........110.........
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Query Sequence  LKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVE
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Template Sequence  YRVVLIGEQGVGKSTLANIF. . AGVH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   76...80.........90..... ....
 
   120.........130.........140.........150.........160.........170.........180.........190.........
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Query Sequence  KVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQSV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DSMDSDLGEDTYERTLMVDGESATIILL. . . .
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   100.........110.........120.......
 
   200.........210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  IFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLL
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Template Sequence  . . . . DMWENKGENEWLHDHCMQVGDAYLIVYSITD. . . . . . . . . . RASFEKASELRIQLRRARQTEDIPIILVGNKSDLV
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STT
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   131........140.........150.........160. ........170.........180.........190......
 
   280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  EEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL
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Template Sequence  RCR. . . . . . . . . . . . . . . . EVSVSEGRACAVVFD. . . . . . . . . . CKFIETSAAVQHNVKELFEGIVRQVRLR
Template Known Secondary structure  GG
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   197.. 200.........210.... .....220.........230.........240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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