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Job DescriptionP50148
Confidence98.16%DateThu Apr 26 09:30:17 BST 2012
Rank101Aligned Residues163
% Identity31%Templatec2h57A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:adp-ribosylation factor-like protein 6; PDBTitle: crystal structure of human adp-ribosylation factor-like 6
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  EVHVLCLGLDNSGKTTII. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   17..20.........30....
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKLKPSNAQSQN. . . . . . ILPTIGFSIEKFKSSS
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GGG

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   35....40...... ...50.........60..
 
   199200.........210.........220.........230.........240.........250.........260. ........270......
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Query Sequence  VIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITY. . PWFQNSSVILFLNKK
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Template Sequence  LSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSD. . . . . . . . . . RLRMVVAKEELDTLLNHPDIKHRRIPILFFANKM
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STTTGGGGGGGGGG
STT
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   63......70.........80.........90........ .100.........110.........120.........130..
 
   277..280.........290.........300.........310.........320.........330.........340........
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Query Sequence  DLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI
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Template Sequence  DL. . . . . . . . . . . . . . . . . . RDAVTSVKVS. . . . . QLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI
Template Known Secondary structure  TS..................TT


.....TGGG

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BTTTTBT
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   133. .....140.... .....150.........160.........170.........180.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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