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Job DescriptionP50148
Confidence100.00%DateThu Apr 26 09:30:17 BST 2012
Rank7Aligned Residues302
% Identity55%Templatec2g83B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:guanine nucleotide-binding protein g(i), alpha-1 PDBTitle: structure of activated g-alpha-i1 bound to a nucleotide-2 state-selective peptide: minimal determinants for3 recognizing the active form of a g protein alpha subunit
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  ELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDV
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Template Sequence  EVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLF. . . .
Template Known Secondary structure 

STTSSSTTS



TTGGGT



SSGGGT....
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   33......40.........50.........60.........70.........80.........90.........100........
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  EKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIEYPFDLQS
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Template Sequence  . . . . . VLAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKD
Template Known Secondary structure  .....TT

TTTTTTSSTT
GGGS


TTTT
TTT
SSS



S





S
TT
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   109110.........120.........130.........140.........150.........160.........170.........180...
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  VIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDL
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Template Sequence  LHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDL
Template Known Secondary structure 


SGGGGGGGGGG
SS

GGGTT
B
SSSTTSBS
STTSSS
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   279280.........290.........300.........310.........320 .........330.........340.........350
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Query Sequence  LEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDS. DKIIYSHFTCATDTENIRFVFAAVKDTILQ
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Template Sequence  FEEKIKKSPLTICYPEYAG. SNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIK
Template Known Secondary structure  TTTS
GGGT
TT

S.

STTS
S
TTT


TTSTTTT
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   274.....280.........290.. .......300.........310.........320.........330.........340.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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