Job Description P52594 Confidence 21.75% Date Thu Apr 26 09:46:29 BST 2012 Rank 117 Aligned Residues 108 % Identity 21% Template d1m06f_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) ssDNA viruses Microviridae-like VP Resolution 3.50

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		28	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure											.								.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.	.	.	.
Query SS confidence											.								.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.	.	.	.
Query Sequence		K	C	F	D	C	D	Q	R	G	.	P	T	Y	V	N	M	T	.	.	.	.	.	.	.	.	.	V	G	S	F	V	C	T	S	C	S	G	S	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	.	.	.	.	.	T	T	F	T	Q	Q	E	I	E	F	L	Q	K	H	G	N	E	.	.	.	.	.
Query Conservation											.								.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.	.	.	.
Alig confidence											.								.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		L	A	F	D	C	G	M	L	G	R	L	K	T	V	S	W	T	P	V	I	A	G	D	S	F	E	L	D	A	V	G	A	L	R	L	S	P	L	R	R	G	L	A	I	D	S	K	V	D	F	F	T	F	Y	I	P	H	R	H	V	Y	G	D	Q	W	I	Q	F	M	R	D	G	V	N	A	Q	P	L	P	S
Template Known Secondary structure									S	S												T	T																B	S	S	S																					T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
			88	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.						.	.	.	.	.
Query SS confidence		.						.	.	.	.	.
Query Sequence		.	V	C	K	Q	I	.	.	.	.	.	W	L	G	L	F	D	D	R	S	S	A	I	P	D	F	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K	K	R	W	Y	V	P	P	E	Q	A	K	V	V	A
Query Conservation		.						.	.	.	.	.
Alig confidence		.						.	.	.	.	.																							.	.
Template Conservation																																			.	.
Template Sequence		V	T	C	N	R	Y	P	D	H	A	G	Y	V	G	T	I	V	P	A	N	N	R	I	P	K	F	L	H	Q	S	Y	L	N	.	.	I	Y	N	N	Y	F	R	A	P	W	M	P	E	R	T	E	A	N	P	S	N
Template Known Secondary structure						S	S	T	T	T	T	G	G	G	T	S				T	T	S													.	.						T	S		T	T	S						S	S	G	G	G
Template Predicted Secondary structure																																			.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions