 |
| Job Description | P52594 | | Confidence | 36.07% | Date | Thu Apr 26 09:46:29 BST 2012 |
| Rank | 61 | Aligned Residues | 25 |
| % Identity | 32% | Template | c3k7aM_ |
| PDB info |
PDB header:transcription | Chain: M: PDB Molecule:transcription initiation factor iib; |
PDBTitle: crystal structure of an rna polymerase ii-tfiib complex
|
| Resolution | 3.80 Å |
|
| | |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . |
| Predicted Secondary structure | |
 | |  |
|
|
|
|
|
|
|
| | | . | |
|
|
|
|
|  | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
K | C | F | D | C | D | Q | R | G | P | T | Y | V | . |
N | M | T | V | G | S | F | V | C | T | S | C |
| Query Conservation | |
|
| | |
| | | | | | | | | . | | | | | | | | |
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
| | | | | |
|
| |
| | | |
| | |
|
| | |
|
| Template Sequence | |
T | C | P | E | C | K | V | Y | P | P | K | I | V | E | R | F | S | E | G | D | V | V | C | A | L | C |
| Template Known Secondary structure | |
|
| S | T | T |
|
| S |
|
|
|
|
|
|
| S | S | S |
| S |
|
|
| S | S | S |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
| | | | |
|
|
|
|
| | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
