Job Description P52594 Confidence 45.06% Date Thu Apr 26 09:46:29 BST 2012 Rank 40 Aligned Residues 89 % Identity 9% Template c3auoB_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna polymerase beta family (x family); PDBTitle: dna polymerase x from thermus thermophilus hb8 ternary complex with 1-2 nt gapped dna and ddgtp Resolution 2.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	K	M	L	R	D	M	T	G	L	P	H	N	R	K	C	F	D	C	D	Q	R	G	P	T	Y	V	N	M	T	V	G	S	F	V	C	T	S	C	S	G	S	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	Q	Q	E	I	E	F	L	Q	K	H	G	N	E	V	C	K	Q	I
Query Conservation
Alig confidence												.	.	.																.	.	.	.	.	.	.															.	.			.																.
Template Conservation												.	.	.																.	.	.	.	.	.	.															.	.			.																.
Template Sequence		W	E	A	V	F	Q	K	A	K	E	.	.	.	K	G	V	A	V	E	I	D	G	Y	Y	D	R	M	D	.	.	.	.	.	.	.	L	P	D	D	L	A	R	M	A	Y	G	M	G	L	.	.	W	I	.	S	L	S	T	D	A	H	Q	T	D	H	L	R	F	M	.	E	L	A	V	G	T	A	Q	R	A
Template Known Secondary structure												.	.	.	T	T									T	T	T		B	.	.	.	.	.	.	.	S											T	T		.	.			.						B	S	S	G	G	G	G	G	G		.										T
Template Predicted Secondary structure												.	.	.																.	.	.	.	.	.	.															.	.			.																.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.				.	.	.	.	.	.	500	.	.	.	.	.	.	.	.								.	510	.	.	.	.	.	.	.	.	.	520	.	.			.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	G	L	F	D	D	R	S	S	A	I	P	D	F	R	D	P	Q	K	V	K	E	F	L	Q	E	K
Query Conservation
Alig confidence			.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		W	.	.	.	.	.	I	G	P	E	R	V	L	N	T	L	D	Y	E	D	L	L	S	W	L	K	A	R
Template Known Secondary structure		T	.	.	.	.	.			S	T	T	B	G	G	G	S
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		550						.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions