Return to main results Retrieve Phyre Job Id

Job DescriptionP52594
Confidence100.00%DateThu Apr 26 09:46:29 BST 2012
Rank9Aligned Residues111
% Identity21%Templatec2owaB_
PDB info PDB header:protein transportChain: B: PDB Molecule:arfgap-like finger domain containing protein; PDBTitle: crystal structure of putative gtpase activating protein for2 adp ribosylation factor from cryptosporidium parvum3 (cgd5_1040)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.. .......70.........80........
Predicted Secondary structure 
























.


Query SS confidence 




















































.

























Query Sequence  EEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPP. HRVKSISMTTFTQQEIEFLQKHGNEV
Query Conservation                  
  
  
                
  
    
     .    
                 

  
Alig confidence 




















































.

























Template Conservation            
   
 
  




   
 


   




  





 

 


 



 

 
    
  
   

  
Template Sequence  DKLRDNFFQIVRNRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLDKFTPIQLVRMDIGGNGR
Template Known Secondary structure  TTSGGGSB
TTT

BS

TTTT
T
TTT

TTTS




Template Predicted Secondary structure 




























Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90.........
 
   8990.........100.........110.........120....
Predicted Secondary structure 














Query SS confidence 



































Query Sequence  CKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKK
Query Conservation                                      
Alig confidence 

















....













Template Conservation   
   
            ....      
  

   
Template Sequence  ARNYFKQVLGVNFSPKTK. . . . EYASSICGRQYKQI
Template Known Secondary structure 
TT

GGG
....S
Template Predicted Secondary structure 








....
Template SS confidence 



































   100.........110....... ..120.........130.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions