Job Description P52594 Confidence 43.85% Date Thu Apr 26 09:46:29 BST 2012 Rank 45 Aligned Residues 87 % Identity 18% Template c2i50A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 16; PDBTitle: solution structure of ubp-m znf-ubp domain Resolution UNK

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.								.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.								.	.	.	.
Query Sequence		H	L	K	M	L	R	D	M	T	G	L	P	H	N	R	K	C	F	D	C	D	Q	R	G	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	N	M	T	V	G	S	F	V	C	.	.	.	.	.	T	S	C	S	G	S	L	.	.	.	.	R	G	L	N	P	P	H	R	V	K	S	I	S
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.								.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.								.	.	.	.					.	.					.
Template Conservation																																																																									.	.					.
Template Sequence		E	Q	G	N	L	K	K	A	L	V	N	V	E	W	N	I	C	Q	D	C	K	T	D	N	K	V	K	D	K	A	E	E	E	T	E	E	K	P	S	V	W	L	C	L	K	C	G	H	Q	G	C	G	R	N	S	Q	E	Q	H	A	L	K	H	Y	L	T	P	R	S	E	P	.	.	H	C	L	V	.	L	S
Template Known Secondary structure											S	S			S	S	S						T		T	T	S	S		S	S		T	T	T										T	T	T							T	T	S	S	S									S			S	S		.	.					.
Template Predicted Secondary structure																																																																									.	.					.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.		90	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	T	F	T	Q	Q	E	I	E	F	L	Q	K	H	G	N	E	V	C	K	Q	I	W	L	G	L	F	D	D	R	S	S	A	I	P	D	F	R	D	P	Q	K	V	K	E	F	L	Q	E	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		L	D	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	W	C	Y	V	C	D	N	.	E	V	Q	Y	C	S	S	N	Q	L	G	Q	V	V	D	Y	V	R	K	Q
Template Known Secondary structure		T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T		.						T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		92	.	.	.																		.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions