Return to main results Retrieve Phyre Job Id

Job DescriptionP52594
Confidence100.00%DateThu Apr 26 09:46:29 BST 2012
Rank8Aligned Residues119
% Identity19%Templatec2b0oF_
PDB info PDB header:metal binding proteinChain: F: PDB Molecule:uplc1; PDBTitle: crystal structure of uplc1 gap domain
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.. .......70.........80.........90..
Predicted Secondary structure 
























.


Query SS confidence 
















































.





























Query Sequence  LKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPP. HRVKSISMTTFTQQEIEFLQKHGNEVCKQI
Query Conservation              
  
  
                
  
    
     .    
                 

      
Alig confidence 
















































.





























Template Conservation              
  



    
 
 
 
 
   
  


 

 

   
 
 
   
 
           

   
 
Template Sequence  KLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLALNMGNTSFNEV
Template Known Secondary structure  STTTTB
TTT

BS

TTTT

TTT

TTTS


GGGG

Template Predicted Secondary structure 































Template SS confidence 















































































   426...430.........440.........450.........460.........470.........480.........490.........500.....
 
   93......100.........110..... ....120.........130..
Predicted Secondary structure 













.








Query SS confidence 






















.
















Query Sequence  WLGLFDDRSSAIPDFRDPQKVKE. FLQEKYEKKRWYVPPEQ
Query Conservation                         .                 
Alig confidence 






















.
















Template Conservation   

 
      

        
  

  

  
 
  
   
Template Sequence  MEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHRFARRCTP
Template Known Secondary structure  TTTS
TT
TT


TT

TS
TTS




Template Predicted Secondary structure 























Template SS confidence 








































   506...510.........520.........530.........540......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions