Job Description P52594 Confidence 31.28% Date Thu Apr 26 09:46:29 BST 2012 Rank 82 Aligned Residues 56 % Identity 11% Template c1tjlD_ PDB info PDB header:transcription Chain: D: PDB Molecule:dnak suppressor protein; PDBTitle: crystal structure of transcription factor dksa from e. coli Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																														.	.						.
Query SS confidence																														.	.						.
Query Sequence		M	A	A	S	A	K	R	K	Q	E	E	K	H	L	K	M	L	R	D	M	T	G	L	P	H	N	R	K	.	.	C	F	D	C	D	.	Q	R	G	P	T	Y	V	N	M	T	V	G	S	F	V	C	T	S	C	S	G	S	L
Query Conservation																														.	.						.
Alig confidence																														.	.						.
Template Conservation
Template Sequence		L	E	L	R	N	R	D	R	E	R	K	L	I	K	K	I	E	K	T	L	K	K	V	E	D	E	D	F	G	Y	C	E	S	C	G	V	E	I	G	I	R	R	L	E	A	R	P	T	A	D	L	C	I	D	C	K	T	L	A
Template Known Secondary structure																										T	T			S	B		S	S	S	S		B										T	T			S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions