Return to main results Retrieve Phyre Job Id

Job DescriptionP52594
Confidence34.32%DateThu Apr 26 09:46:29 BST 2012
Rank65Aligned Residues88
% Identity17%Templatec1oahA_
PDB info PDB header:reductaseChain: A: PDB Molecule:cytochrome c nitrite reductase; PDBTitle: cytochrome c nitrite reductase from desulfovibrio2 desulfuricans atcc 27774: the relevance of the two3 calcium sites in the structure of the catalytic subunit4 (nrfa).
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40... ......50.........60.........70....... ..80.........90........
Predicted Secondary structure 









.....











.....


Query SS confidence 














. . . . .

































. . . . .




















Query Sequence  CFDCDQRGPTYVNMT. . . . . VGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQE. . . . . IEFLQKHGNEVCKQIWLGLFD
Query Conservation 
  
           .....     
  
    
         
          .....       

            
Alig confidence 














.....








..........














.....




















Template Conservation 






  
 
    
       

  
..........
 
         
   
                       
Template Sequence  CADCHMQYISSHWMTSPMKDPEMRACRQC. . . . . . . . . . HADKTGEYLRQRVLYTQQKTFDQLLKAQEMSVKAHEAVRLA
Template Known Secondary structure  S







S
GGG
TT
TTTTTT..........STTS
Template Predicted Secondary structure 



















..........




Template SS confidence 















































































   317..320.........330.........340..... ....350.........360.........370.........380......
 
   99100.........110.........120.......
Predicted Secondary structure 














Query SS confidence 




























Query Sequence  DRSSAIPDFRDPQKVKEFLQEKYEKKRWY
Query Conservation                               
Alig confidence 
















.










Template Conservation                
  .
    
 

  
Template Sequence  NAYEGHRAANYEALMAE. AREMVRKGQLF
Template Known Secondary structure 

S


TT.
Template Predicted Secondary structure 






.
Template SS confidence 




























   394.....400.........410 .........420.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions