Return to main results Retrieve Phyre Job Id

Job DescriptionP52594
Confidence20.25%DateThu Apr 26 09:46:29 BST 2012
Rank123Aligned Residues15
% Identity27%Templatec1favC_
PDB info PDB header:viral proteinChain: C: PDB Molecule:protein (transmembrane glycoprotein); PDBTitle: the structure of an hiv-1 specific cell entry inhibitor in complex2 with the hiv-1 gp41 trimeric core
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20
Predicted Secondary structure 
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Query Sequence  KRKQEEKHLKMLRDM
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Template Conservation 

 





 


 
Template Sequence  SQNQQEKNEQELLEL
Template Known Secondary structure 

Template Predicted Secondary structure 

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   139140.........150...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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