Return to main results Retrieve Phyre Job Id

Job DescriptionQ9H3Y6
Confidence100.00%DateSat Jun 16 10:17:08 BST 2012
Rank131Aligned Residues257
% Identity18%Templatec4apcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek1; PDBTitle: crystal structure of human nima-related kinase 1 (nek1)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220......... 230.........240......... 250.........260........ .270.........280.........290...
Predicted Secondary structure 








..


.









...




Query SS confidence 









. .



















.


















. . .
























Query Sequence  QDVWERPHSE. . FALGRKLGEGYFGEVWEGLW. LGSLPVAIKVIKSANMKLT. . . DLAKEIQTLKGLRHERLIRLHAVCS
Query Conservation       
    ..  
   

 
 

 
  
  .     



 
        ... 
  
   
  
 




 
 
   
Alig confidence 









..



















.


















...
























Template Conservation                    

 
  
 

       
  



 
               

  
  
 




 
     
Template Sequence  HHHHDLGTENLYFQSMEKYVRLQKIKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE
Template Known Secondary structure 




TT
S

B
S





TTT


TT




TTB

Template Predicted Secondary structure 
























Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions