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Job DescriptionQ9H3Y6
Confidence100.00%DateSat Jun 16 10:17:08 BST 2012
Rank43Aligned Residues247
% Identity24%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260.... .....270.........280.........290.........300...
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Query Sequence  HSEFALGRKLGEGYFGEVWEGLWLGSLPVAIKVIKSAN. . . MKLTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTE
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVL. AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD
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   10.........20.........30.. .......40.........50.........60.........70.........80........
 
   304.....310.........320.........330.........340.........350.........360... ......370.........380
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Query Sequence  LMRKGNLQAFLGTPEGRALRLPPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLVDDGLA. . . CKVADFGLARLLKDDIY
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Template Sequence  LVTGGELFEDIVARE. . YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE. Q
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B

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   91........100..... ....110.........120.........130.........140.........150.........160...... .
 
   381........390.........400.........410.........420.........430.........440.... .....450.......
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Query Sequence  SPSSSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETLQQIMRGYR. . . LPRPAACPAEVYV
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Template Sequence  QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD
Template Known Secondary structure 
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   168.170.........180.........190.........200........ .210.........220.........230.........240......
 
   458.460.........470........
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Query Sequence  LMLECWRSSPEERPSFATLRE
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Template Sequence  LINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
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   247..250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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