Phyre 2 alignment of Q9H3Y6 with c3mdyC

Job Description Q9H3Y6
Confidence 100.00% Date Sat Jun 16 10:17:08 BST 2012

Rank 176 Aligned Residues 276

% Identity 25% Template c3mdyC_

PDB info PDB header:transferase/isomerase Chain: C: PDB Molecule:bone morphogenetic protein receptor type-1b; PDBTitle: crystal structure of the cytoplasmic domain of the bone morphogenetic2 protein receptor type-1b (bmpr1b) in complex with fkbp12 and ldn-3 193189

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	L	E	E	L	L	T	Y	Y	K	A	N	W	K	L	I	Q	N	P	L	L	Q	P	C	M	P	Q	K	A	P	R	Q	D	V	W	E	R	P	H	S	E	F	A	L	G	R	K	L	G	E	G	Y	F	G	E	V	W	E	G	L	W	L	G	S	L	P	V	A	I	K	V	I	K	S	A	N	M	K	L	T
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence	S	L	R	D	L	I	E	Q	S	Q	S	S	G	S	G	S	G	L	P	L	L	V	Q	R	T	I	A	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	Q	M	V	K	Q	I	G	K	G	R	Y	G	E	V	W	M	G	K	W	.	R	G	E	K	V	A	V	K	V	F	F	T	T	E	E	A	S	W
Template Known Secondary structure														S		S	S	S						T	T			.	.	.	.	.	.	.	.	.	.	.	.													T	T									.	T	T										G	G	G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.													.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

	269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.					.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence	D	L	A	K	E	I	Q	T	L	K	G	L	R	H	E	R	L	I	R	L	H	A	V	C	S	G	G	E	.	.	.	.	P	V	Y	I	V	T	E	L	M	R	K	G	N	L	Q	A	F	L	G	T	P	E	G	R	A	L	R	L	P	P	L	L	G	F	A	C	Q	V	A	E	G	M	S	Y	L	E	E	Q
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence	F	R	E	T	E	I	Y	Q	T	V	L	M	R	H	E	N	I	L	G	F	I	A	A	D	I	K	G	T	G	S	W	T	Q	L	Y	L	I	T	D	Y	H	E	N	G	S	L	Y	D	Y	L	K	S	T	T	.	.	.	L	D	A	K	S	M	L	K	L	A	Y	S	S	V	S	G	L	C	H	L	H	T	E
Template Known Secondary structure								T	S	T	T				T	T	B										S		G	G	G											T	T		B										.	.	.	B																					S
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
	242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

									345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.							.	.	.	.	.	.	.	.	410
Predicted Secondary structure	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	R	V	V	H	R	D	L	A	A	R	N	V	L	V	D	D	G	L	A	C	K	V	A	D	F	G	L	A	R	L	L	K	D	D	I	Y	S	P	S	S	S	S	K	I	P	V	K	W	T	A	P	E	A	A	N	Y	R	.	.	.	.	.	.	V	F	S	Q	K	S	D	V	W
Query Conservation	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.																																								.	.	.	.															.	.	.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence	I	F	S	T	Q	G	K	P	A	I	A	H	R	D	L	K	S	K	N	I	L	V	K	K	N	G	T	C	C	I	A	D	L	G	L	A	V	K	F	I	I	P	P	N	T	R	V	.	.	.	.	G	T	K	R	Y	M	P	P	E	V	L	D	E	S	L	N	R	N	H	F	Q	S	Y	I	M	A	D	M	Y
Template Known Secondary structure	B		S	T	T		B						S				G	G	G					T	T	S								T	T										S	S		.	.	.	.	S		G	G	G							T	S				T	T		T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
	319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

	411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430																.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450							.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence	S	F	G	V	L	L	H	E	V	F	T	Y	G	Q	C	P	Y	E	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	H	E	T	L	Q	Q	I	M	R	G	Y	R	L	P	R	P	A	A	.	.	.	.	.	.	C	P	A	E	V	Y	V	L	M	L	E	C	W	R	S	S	P	E	E
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation												.
Template Sequence	S	F	G	L	I	L	W	E	V	A	R	.	R	C	V	S	G	G	I	V	E	E	Y	Q	L	P	Y	H	D	L	V	P	S	D	P	S	Y	E	D	M	R	E	I	V	C	I	K	K	L	R	P	S	F	P	N	R	W	S	S	D	E	C	L	R	Q	M	G	K	L	M	T	E	C	W	A	H	N	P	A	S
Template Known Secondary structure											T	.	T	B		B	T	T	B							T	T	T	T	T	S		S	S											T	T	S								G	G	G	G	G															S		S	S	G	G	G
Template Predicted Secondary structure												.
Template SS confidence
	402	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	P	S	F	A	T	L	R	E	K	L	H	A	I	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence	R	L	T	A	L	R	V	K	K	T	L	A	K	M	S	E
Template Known Secondary structure	S
Template Predicted Secondary structure
Template SS confidence
	481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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