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Job DescriptionQ9H3Y6
Confidence100.00%DateSat Jun 16 10:17:08 BST 2012
Rank63Aligned Residues240
% Identity26%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240......... 250.........260.........270.........280.........290.........300......
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Query Sequence  SEFALGRKLGEGYFGEVWEGLW. LGSLPVAIKVIKSANMKLTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTELMR
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   307..310.........320.........330.........340.........350........ .360.........370.........380...
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Query Sequence  KGNLQAFLGTPEGRALRLPPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLV. . . DDGLACKVADFGLARLLKDDIYSPS
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Template Sequence  GGELFDEIIHRMK. . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE
Template Known Secondary structure  S
BSS..

TT
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B

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   143......150..... ....160.........170.........180.........190.........200.........210.........220
 
   384.....390.........400.........410.........420.........430.........440... ......450.........460
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Query Sequence  SSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETLQQIMRGY. . . RLPRPAACPAEVYVLML
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Template Sequence  R. . LGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK
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   221 ........230.... .....240.........250..... ....260.........270.........280.........290......
 
   461........470........
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Query Sequence  ECWRSSPEERPSFATLRE
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Template Sequence  QMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   297..300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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