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Job DescriptionQ9H3Y6
Confidence100.00%DateSat Jun 16 10:17:08 BST 2012
Rank208Aligned Residues240
% Identity23%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250.........260....... ..270.........280. ........290.....
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Query Sequence  DVWERPHSEFALGRKLGEGYFGEVWEGLWLGSLPVAIKVIKSANMKL. . . TDLAKEIQTLKGLR. . HERLIRLHAVCSGG
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Template Sequence  QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD
Template Known Secondary structure 
TT

SS
TT


SS

GGG
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S
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   516...520.........530.........540.........550.........560.........570.........580.........590.....
 
   296...300.........310.........320.........330.........340.........350.........360.........370.....
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Query Sequence  EPVYIVTELMRKGNLQAFLGTPEGRALRLPPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLVDDGLACKVADFGLARLL
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Template Sequence  QYIYMVMECGNIDLNSWLKK. . . KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . .
Template Known Secondary structure  S


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   596...600.........610..... ....620.........630.........640.........650....... ..660........
 
   376...380.........390.........400.. .......410.........420......... 430.........440. ........450..
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Query Sequence  KDDIYSPSSSSKIPVKWTAPEAANYRV. FSQKSDVWSFGVLLHEVFTYGQCPYEG. MTNHETLQQIMR. GYRLPRPAACP
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Template Sequence  . . . . . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPE
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   669670.........680.........690.........700..... ....710.........720.........730.......
 
   453......460.........470........
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Query Sequence  AEVYVLMLECWRSSPEERPSFATLRE
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Template Sequence  KDLQDVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   762.......770.........780.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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