Job Description Q9H3Y6 Confidence 99.92% Date Sat Jun 16 10:17:08 BST 2012 Rank 327 Aligned Residues 126 % Identity 22% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	I	T	H	V	A	K	A	S	P	E	T	L	S	D	Q	P	W	Y	F	S	G	V	S	R	T	Q	A	Q	Q	L	L	L	S	P	P	N	E	P	G	A	F	L	I	R	P	S	E	S	S	L	G	G	Y	S	L	S	V	R	A	Q	A	K	V	C	H	Y	R	V	S	M	A	A	D	G	S	L	Y
Query Conservation
Alig confidence												.	.																								.	.																																						.
Template Conservation												.	.																								.	.																																						.
Template Sequence		M	V	Q	S	S	L	T	E	E	L	.	.	K	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	.	.	N	V	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R	S	H	G	K	T	L	H	T	R	I	E	H	S	.	N	G	R	F	S
Template Known Secondary structure												.	.							T		B			S										T	T	.	.	T	S		T	T								S	S	T	T		S								T	T											.	T	T
Template Predicted Secondary structure												.	.																								.	.																																						.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.
		181	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		L	Q	.	.	.	K	G	R	L	F	P	G	L	E	E	L	L	T	Y	Y	K	A	N	W	K	L	I	Q	N	P	L	L	Q	P	C	M	P	Q	K	A	P	R	Q	D	V	W	E	R	P	H	S	E	F	A
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V	R	L	T	N	P	V	S	R	F	M
Template Known Secondary structure			T	T			S				B	S	S															T						S			S	T	T											B			S	S
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions