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Job DescriptionQ9H3Y6
Confidence100.00%DateSat Jun 16 10:17:08 BST 2012
Rank258Aligned Residues229
% Identity27%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260.........270.........280.........290.........300.........310.
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Query Sequence  LGRKLGEGYFGEVWEGLWLGSLPVAIKVIKSANMKLTDLAKEIQTLKGLRHERLIRLHAVCSGGEPVYIVTELMRKGNLQ
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Template Sequence  MEKYLEKVGEGVVYKAKD. SQRIVALKRIS. . . . . . . TAIREISLLKELHHPNIVSLIDVIHSECL. TLVFEFMEKDLKK
Template Known Secondary structure  S
B


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S
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   20.........30....... ..40........ .50.........60.........70....... ..80.........90
 
   312.......320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  AFLGTPEGRALRLPPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLVDDGLACKVADFGLARLLKDDIYSPSSSSKIPVK
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Template Sequence  VLDE. . NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI. NSDALKLADFGLARAFGIPVRVVTLWY. . . . .
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TT


TT




GGG.






TT
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   108.110. ........120.........130.........140.........150.. .......160.........170.........
 
   392.......400.........410.........420.........430.........440........
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Query Sequence  WTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETLQQIMRGYRLPRP. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RAPDVLMGSKKYSTSVDIWSIGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK
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TT




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S


SSGGG



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   186...190.........200.........210..... ....220.........230.........240.........250.........260....
 
   449450.........460.........470........
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Query Sequence  . . . . . . AACPAEVYVLMLECWRSSPEERPSFATLRE
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Template Sequence  PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
Template Known Secondary structure 
STT

S
S
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T
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   265....270.........280.........290.........300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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