Job Description Q9H3Y6 Confidence 100.00% Date Sat Jun 16 10:17:08 BST 2012 Rank 18 Aligned Residues 266 % Identity 42% Template c2ivsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																		.	.	.	.	.	.														.	.
Query SS confidence																																		.	.	.	.	.	.														.	.
Query Sequence		R	Q	D	V	W	E	R	P	H	S	E	F	A	L	G	R	K	L	G	E	G	Y	F	G	E	V	W	E	G	L	W	L	.	.	.	.	.	.	G	S	L	P	V	A	I	K	V	I	K	S	A	.	.	N	M	K	L	T	D	L	A	K	E	I	Q	T	L	K	G	L	R	H	E	R	L	I	R	L	H	A
Query Conservation																																		.	.	.	.	.	.														.	.
Alig confidence																																		.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		E	D	P	K	W	E	F	P	R	K	N	L	V	L	G	K	T	L	G	E	G	E	F	G	K	V	V	K	A	T	A	F	H	L	K	G	R	A	G	Y	T	T	V	A	V	K	M	L	K	E	N	A	S	P	S	E	L	R	D	L	L	S	E	F	N	V	L	K	Q	V	N	H	P	H	V	I	K	L	Y	G
Template Known Secondary structure				T	T	T	B			G	G	G											S	S	S									T	G	G	G		S	S											T	T																	T	T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		V	C	S	G	G	E	P	V	Y	I	V	T	E	L	M	R	K	G	N	L	Q	A	F	L	G	T	P	E	G	.	.	.	.	.	.	R	A	L	R	L	P	P	L	L	G	F	A	C	Q	V	A	E	G	M	S	Y	L	E	E	Q	R	V	V	H	R	D	L	A	A	R	N	V	L	V	D	D	G	L	A	C
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	S	Q	D	G	P	L	L	L	I	V	E	Y	A	K	Y	G	S	L	R	G	F	L	R	E	S	R	K	V	G	P	G	Y	L	R	A	L	T	M	G	D	L	I	S	F	A	W	Q	I	S	Q	G	M	Q	Y	L	A	E	M	K	L	V	H	R	D	L	A	A	R	N	I	L	V	A	E	G	R	K	M
Template Known Secondary structure					S	S	S	S									T	T		B								T	T	T	S	T	T																												T	T							S	G	G	G					T	T	T
Template Predicted Secondary structure
Template SS confidence
		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.
		365	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	V	A	D	F	G	L	A	R	L	.	L	K	D	D	I	Y	S	P	S	S	S	S	K	I	P	V	K	W	T	A	P	E	A	A	N	Y	R	V	F	S	Q	K	S	D	V	W	S	F	G	V	L	L	H	E	V	F	T	Y	G	Q	C	P	Y	E	G	M	T	N	H	E	T	L	Q	Q	I	M	R	G	Y
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		K	I	S	D	F	G	L	S	R	D	V	Y	E	E	D	S	Y	V	K	R	S	Q	G	R	I	P	V	K	W	M	A	I	E	S	L	F	D	H	I	Y	T	T	Q	S	D	V	W	S	F	G	V	L	L	W	E	I	V	T	L	G	G	N	P	Y	P	G	I	P	P	E	R	L	F	N	L	L	K	T	G	H
Template Known Secondary structure							T	T					T	T	T	S					S	S				S		G	G	G																													T	T	S			S	S	T	T			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		889	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P	R	P	A	A	C	P	A	E	V	Y	V	L	M	L	E	C	W	R	S	S	P	E	E	R	P	S	F	A	T	L	R	E	K	L	H	A	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	E	R	P	D	N	C	S	E	E	M	Y	R	L	M	L	Q	C	W	K	Q	E	P	D	K	R	P	V	F	A	D	I	S	K	D	L	E	K	M	M
Template Known Secondary structure							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		969	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions