251 c2vagA_ Probab=100.00  E-value=1.7e-38  Score=230.98  Aligned_columns=253  Identities=24%

Q ss_pred             CCCCCEEEEEEEEEECCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEEEC
Q ss_conf             4683107998787434981899999769--9199999988630178999999999985599858------0388858658
Q batch____       224 ERPHSEFALGRKLGEGYFGEVWEGLWLG--SLPVAIKVIKSANMKLTDLAKEIQTLKGLRHERL------IRLHAVCSGG  295 (488)
Q Consensus       224 ~i~~~~~~l~~~LG~G~fG~V~~g~~~~--~~~VAvK~l~~~~~~~~~f~~E~~~l~~l~HpnI------V~l~g~~~~~  295 (488)
                      ++-.+.|++.++||+|+||.||+|++..  ++.||||+++.+....+.+++|+.+|++++|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf             93799997889885999998478877899999999999999999865156531244731013665322333444102331
Q batch____       296 EPVYIVTELMRKGNLQAFLGTPEGRALRLPPLLGFACQVAEGMSYLEEQRVVHRDLAARNVLVDDGLACKVADFGLARLL  375 (488)
Q Consensus       296 ~~~~lV~E~~~~GsL~~~l~~~~~~~~~~~~~~~~~~qia~gL~yLh~~~~iHrdlk~~Nili~~~~~~ki~dfGls~~~  375 (488)
                      ..++++++++ .++....................+..++..++.++|...++|+|+++.|++++.....++.+|+.+...
T Consensus        89 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~  167 (330)
T c2vagA_          89 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTL  167 (330)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEE
T ss_pred             CEECCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCC
T ss_conf             0000122112-367521112221110136565555544555554311012222345541589857886200034543344


Q ss_pred             CCCCCEEEE----------CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC----
Q ss_conf             567621220----------135477637978994689875789999999999999488999988798999999980----
Q batch____       376 KDDIYSPSS----------SSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETLQQIMR----  441 (488)
Q Consensus       376 ~~~~~~~~~----------~~~~~~~y~APE~l~~~~~s~ksDVwSfGvil~El~t~G~~P~~~~~~~ev~~~i~~----  441 (488)
                      .........          .......+.+||......++.++|+|++|++++++.+ ++.|+...+..+....+..    
T Consensus       168 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~  246 (330)
T c2vagA_         168 INPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGP  246 (330)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCS
T ss_pred             CCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             44321000146633267542001210232100000111123542102258731004-88988758968999999851388


Q ss_pred             ---------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             ---------------------------------------8999998568999999999863789678699999999
Q batch____       442 ---------------------------------------GYRLPRPAACPAEVYVLMLECWRSSPEERPSFATLRE  478 (488)
Q Consensus       442 ---------------------------------------g~r~~~p~~~p~~l~~li~~C~~~dP~~RPt~~~i~~  478 (488)
                                                             ....+.+..+++++.+||.+||+.||++|||+++|++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         247 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             9988974420121235465665321000111001233310023565458999999999866588111776789967


