Job Description A0AVF1 Confidence 50.54% Date Sat Jun 16 10:27:57 BST 2012 Rank 146 Aligned Residues 165 % Identity 8% Template d1ya0a1 SCOP info alpha-alpha superhelix TPR-like Tetratricopeptide repeat (TPR) Resolution 2.55

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	L	K	S	L	M	D	N	A	S	S	S	F	E	F	A	K	E	L	I	R	H	N	L	V	V	F	R	G	G	E	G	A	L	Q	V	L	P	P	L	V	D	V	I	P	E	A	R	L	N	L	V	I	Y	Y	L	R	Q	D	D	V	Q	E	A	Y	N	L	I	K	D	L	E	P	T	T	P	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	L	Y	Q	K	M	L	V	T	D	L	E	Y	A	L	D	K	K	V	E	Q	D	L	W	N	H	A	F	K	N	Q	I	T	T	L	Q	G	Q	A	K	N	R	A	N	P	N	R	S	E	V	Q	A	N	L	S	L	F	L	E	A	A	S	G	F	Y	T	Q	L	L	Q	E	L	C	T	Q	S	S	S	C
Template Known Secondary structure																				T										T												S		S	S		T	T	T	T																									T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	L	K	G	V	V	N	A	A	L	G	Q	E	M	G	S	R	D	H	M	K	I	A	Q	Q	F	F	Q	L	V	G	G	S	A	S	E	C	D	T	I	P	G	R	Q	C	M	A	S	C	F	F	L	L	K	Q	F	D	D	V	L	I	Y	L	N	S	F	K	S	Y	F	Y	N	D	D	I	F	N	F	N
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		S	Y	I	C	Q	H	C	L	V	H	L	G	D	I	A	R	Y	R	N	Q	T	S	Q	A	E	S	Y	Y	R	H	A	A	Q	L	.	.	V	P	S	N	G	Q	P	Y	N	Q	L	A	I	L	A	S	S	K	G	D	H	L	T	T	I	F	Y	Y	C	R	S	I	A	V	K	F	P	F	P	A	A	S	T	N
Template Known Secondary structure																			T	T																.	.		T	T	B	S													T	T														S	S	S	B
Template Predicted Secondary structure																																				.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		399	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	Q	A	K	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	K	A	L	S	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions