Job Description A0AVF1 Confidence 88.53% Date Sat Jun 16 10:27:57 BST 2012 Rank 136 Aligned Residues 194 % Identity 13% Template c3rjvA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:putative sel1 repeat protein; PDBTitle: crystal structure of a putative sel1 repeat protein (kpn_04481) from2 klebsiella pneumoniae subsp. pneumoniae at 1.65 a resolution Resolution 1.65 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Q	E	V	L	A	V	Y	L	Q	Q	I	P	D	S	T	I	A	L	N	L	K	A	C	N	H	F	R	L	Y	N	G	R	A	A	E	A	E	L	K	S	L	M	D	N	A	S	S	S	F	E	F	A	K	E	L	I	R	H	N	L	V	V	F	R	G	G	E	G	A	L	Q	V	L	P	P	L	V	D
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		E	P	G	S	Q	Y	Q	Q	Q	A	.	.	E	A	G	D	R	R	A	Q	Y	Y	L	A	D	T	W	V	S	S	G	D	Y	Q	K	A	E	Y	W	A	Q	K	A	A	A	Q	G	D	G	D	A	L	A	L	L	A	Q	L	K	I	R	N	P	Q	Q	A	D	Y	P	Q	A	R	Q	L	A	E	K	A	V	E
Template Known Secondary structure			T	T								.	.		T	T																T															T	T												T	T	S	S	T	T	S
Template Predicted Secondary structure												.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		V	I	P	E	A	R	L	N	L	V	I	Y	Y	L	R	.	.	.	.	.	Q	D	D	V	Q	E	A	Y	N	L	I	K	D	L	E	P	T	T	P	Q	E	Y	I	L	K	G	V	V	N	A	A	L	G	Q	E	M	G	S	R	D	H	M	K	I	A	Q	Q	F	F	Q	L	V	G	G	S	A	S	E	C	D
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																						.
Template Conservation																																																											.
Template Sequence		A	G	S	K	S	G	E	I	V	L	A	R	V	L	V	N	R	Q	A	G	A	T	D	V	A	H	A	I	T	L	L	Q	D	A	A	R	D	S	E	S	D	A	A	V	D	A	Q	X	L	L	G	L	I	Y	A	S	G	.	V	H	G	P	E	D	D	V	K	A	S	E	Y	F	K	G	S	S	S	L	S	R
Template Known Secondary structure		T	T													T		G	G	G	S	S														T	S	S	T	T	S																	T	.	S	S	S	S																T	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		T	I	P	G	R	Q	C	M	A	S	C	F	F	L	.	.	.	.	.	.	L	K	Q	F	D	D	V	L	I	Y	L	N	S	F	K	S	Y	F	Y	N	D	D	I	F	N	F	N	Y
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	Y	A	E	Y	W	A	G	X	X	F	Q	Q	G	E	K	G	F	I	E	P	N	K	Q	K	A	L	H	W	L	N	V	S	C	L	E	G	F	D	T	G	C	E	E	F	D	R
Template Known Secondary structure		T	T														B	T	T	T	B																		T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions