Job Description A0AVF1 Confidence 34.01% Date Sat Jun 16 10:27:57 BST 2012 Rank 153 Aligned Residues 154 % Identity 11% Template c3re2A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:predicted protein; PDBTitle: crystal structure of menin reveals the binding site for mixed lineage2 leukemia (mll) protein Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	R	A	K	P	A	V	G	R	G	V	Q	H	T	D	K	R	K	K	K	G	R	K	I	P	K	L	E	E	L	L	S	K	R	D	F	T	G	A	I	T	L	L	E	F	K	R	H	V	G	E	E	E	E	D	T	N	L	W	I	G	Y	C	A	F	H	L	G	D	Y	K	R	A	L	E	E	Y	E
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	S	S	I	N	P	N	I	N	H	T	T	D	S	I	Q	L	S	Q	L	Q	Q	E	L	L	W	L	L	Y	D	M	G	H	I	K	T	Y	P	M	A	I	A	N	L	G	D	L	E	E	I	S	P	T	P	G	R	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	L	F	K
Template Known Secondary structure					T							T	T																				T	T	T	T	T	T															S			T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																.	.	.	.	.	.
		82	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		N	A	T	K	E	.	.	.	.	.	E	N	C	N	S	E	V	W	V	N	L	A	C	T	Y	F	F	L	G	M	Y	K	Q	A	E	A	A	G	F	K	A	S	K	S	R	L	Q	N	R	L	L	F	H	L	A	H	K	F	N	D	E	K	K	L	M	S	F	H	Q	N	L	Q	D	V	T	E	D	Q	L	S
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.
Template Sequence		E	A	I	T	V	A	K	R	E	Y	S	D	H	H	I	Y	P	Y	T	Y	L	G	G	Y	Y	Y	R	K	K	K	Y	Y	E	A	I	A	S	W	V	D	A	G	Y	V	.	.	.	.	.	.	.	.	.	A	G	K	Y	N	Y	S	K	D	D	E	E	M	Y	K	E	F	H	E	I	A	N	D	L	I	P	N
Template Known Secondary structure											S	T	T			S													T	T																.	.	.	.	.	.	.	.	.		T	T	S				G	G	G													T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.										.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	I	H	Y	M	R	S	H	Y	Q	E	A	I	D	I	Y	K	R	I	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	K	D	A	V	A	K	A	N	L	T	S	D	P	K	F	F	A	L	V	L	Q
Template Known Secondary structure								T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions