Job Description A0AVF1 Confidence 99.51% Date Sat Jun 16 10:27:57 BST 2012 Rank 90 Aligned Residues 203 % Identity 15% Template c3nf1A_ PDB info PDB header:motor protein, transport protein Chain: A: PDB Molecule:kinesin light chain 1; PDBTitle: crystal structure of the tpr domain of kinesin light chain 1 Resolution 2.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		L	E	F	K	R	H	V	G	E	E	E	E	D	T	N	L	W	I	G	Y	C	A	F	H	L	G	D	Y	K	R	A	L	E	E	Y	E	N	A	T	K	E	.	.	.	.	.	.	.	.	E	N	C	N	S	E	V	W	V	N	L	A	C	T	Y	F	F	L	G	M	Y	K	Q	A	E	A	A	G	F	K	A
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	G	G	G	Y	E	I	P	A	R	L	R	T	L	H	N	L	V	I	Q	Y	A	S	Q	G	R	Y	E	V	A	V	P	L	C	K	Q	A	L	E	D	L	E	K	T	S	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	D	A	A	N	L	L	N	D	A
Template Known Secondary structure			S	S	S		T	T	S																	T	T																						S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																																																												.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	S	R	L	Q	N	R	L	L	F	H	L	A	H	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	E	K
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	R	E	K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	A	V	L	Y	G	K	R	G	K	Y	K	E	A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	D	H	P	D	V	A	K	Q	L	N	N	L	A	L	L	C	Q	N	Q	G	K	Y	E	E	V	E	Y	Y
Template Known Secondary structure											T	T																	T	T	T																						T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	S	F	H	Q	N	L	Q	D	V	T	E	D	Q	L	S	L	A	S	I	H	Y	M	R	S	H	Y	Q	E	A	I	D	I	Y	K	R	I	L	L	D	N	R	E	Y	L	A	L	N	V	Y	V	A	L	C	Y	Y	K	L	D	Y	Y	D	V	S	Q	E	V	L	A	V	Y	L	Q	Q	I	P	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	R	A	L	E	I	Y	Q	T	K	L	G	P	D	D	P	N	V	A	K	T	K	N	N	L	A	S	C	Y	L	K	Q	G	K	F	K	Q	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	R	E	F	G	K	P	I	W	M	H	A	E	E	R	E	E	C	T	S	F	G	E	Y	G	S	P	T	V
Template Known Secondary structure												T	S		T	T																			T																																						S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	L	N	L	K	A	C	N	H	F	R	L	Y	N	G	R	A	A	E	A	E	L	K	S	L	M	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	T	L	K	N	L	G	A	L	Y	R	R	Q	G	K	F	E	A	A	E	T	L	E	E	A	A	M	R	S
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions